Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02886 ATGTCGCAGAGCCAGCACAGTGCCCCTCACCAACCTCGATCCTCCGATGGACATGTGACAGCGAGAGTGATGAATTTGAATTCCGATAGGCTCTGCGTAAGCCCCAACCGAGATCACAAGTCCGAAAACTATGAGGACCTTCAACTGGAGTTCAATCCTCACGTCTTCGGCTCACTAGAGCAATATTTGCCTCCTCACGTACTCAACCTCTCACGTGAGGTTAAGGTTCGGTATATGAGGAACATTCTACTTCGCTATTTTCCTGAGAATGACCGCAATCGGATTCAAAAGCTGAGGGAGTACAGGCTAAAGATCATATTGAATTATCCACCACTGCATAGGGACATATATACTATGGATGCTGAGAACTTTTTCAGGCCATCATTTCTCAGAGCAATTAAAGAGAACACCGAAGCAAGTTTTAGAAGTATAATGGCTGAACCTAGTACAGGAATTTATACATTTGAAATGCTTCAACCACAATTTTGTAAAAAACTGATGTCTGAGGTTGATAGTTTTGAAAGATGGGTTCGTGGTACCAAGCTCAGAATCATGCGCCCTAATGCAATGAGTAAACATGGTGTTGTTCTTGAAGATTTTGGTCTGGAAACCATGCTTGACAAATTTATGAGTGATTTCATACATCCCATATCACGAGTTTTCTACAGTGAATTTGGTGGATCCTCGCTGGACTCTCACCACGGTTTTGTTGTTGAATATGGAATCAGTAAAGACGTAGAACTTGGATTACATGTGGATGACTCAGAAGTCTCCTTAAATATTTGCTTGGGAAAAGAATTTTCTGGCGGAGAAGTGTTCTTCCAGGGTGTTCGATGTGAAGAACATGTACTTTCAAATGCCCAACCAGGGGAGATCTTCAATTATTCCCATGTTCCAGGACACGCAGTTCTTCATCCTGGTCGTCAACGACATGGCGCAAGATCTACAACATCTGGGAATAGGATGAATTTAATCATCTGGTGTAGAAGTTCGGCTTTCAGAGAGTTGAAGAAATATCAGAGAGATTTTCCTAGCTGGTGTGGAGAATGCAAACGCAAGAAGAAGGAGAGAGAGCGCCTATCCCTTATGGTCACCCATCAGGAATTACTGAAGAGGGAGATATAA 1125 0.4284 MSQSQHSAPHQPRSSDGHVTARVMNLNSDRLCVSPNRDHKSENYEDLQLEFNPHVFGSLEQYLPPHVLNLSREVKVRYMRNILLRYFPENDRNRIQKLREYRLKIILNYPPLHRDIYTMDAENFFRPSFLRAIKENTEASFRSIMAEPSTGIYTFEMLQPQFCKKLMSEVDSFERWVRGTKLRIMRPNAMSKHGVVLEDFGLETMLDKFMSDFIHPISRVFYSEFGGSSLDSHHGFVVEYGISKDVELGLHVDDSEVSLNICLGKEFSGGEVFFQGVRCEEHVLSNAQPGEIFNYSHVPGHAVLHPGRQRHGARSTTSGNRMNLIIWCRSSAFRELKKYQRDFPSWCGECKRKKKERERLSLMVTHQELLKREI 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02886 374 SMART p4hc 150 329 IPR006620 GO:0005506|GO:0016705|GO:0031418
Phco6g02886 374 PANTHER 2-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE DOMAIN-CONTAINING PROTEIN 2 9 359 - -
Phco6g02886 374 Gene3D q2cbj1_9rhob like domain 148 330 - -
Phco6g02886 374 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 231 330 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02886 Phco-Chr6 49967438 49972829 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g02886 6 49967438 49972829 Phco6g02886 6 49967438 49972829 ECH