Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02881 ATGAGAACAATGGTTACCACTTTCTCGTATCCATCCTCTACCTACTTTGTAAGGTCTTGTTCCATCAGAGAAAACCATGACCAAGTTAAGCAGCCAGTGAACACCGGCATCAGAACTAATGGGAGTTTTAGGTCGCCAATTAAAGTTGAGACACTCAGCAAAATAGCTGGAACTACTTCCACCACTCTGGGTCAAGCTGTTACAGTTGATGAAAATGGTCTGCGCCAAAACATCCCAACAAAGAAGCAATTGGTTGATCCTCATCGCCAAGGGCTCATCACTGAAGGTGGAGTTGGTTATAGACAGACCGTTGTCATTAGGTCCTATGAAGTTGGAGCTGATAAAACTGCCACACTTGAGAGCATCCTTAATCTTCTTCAGGAAACAGCATTAAACCATGTTTGGATGTCTGGGCTGCTCGGTGATGGGTTTGGGGCGACACATGGAATGGTGAGGAACGATCTCATTTGGGTTGTCTCAAGAATGCAAGTTCTGATTGATTACTATCCCATCTGGGGAGAGGTAGTTGAAATTGACACATGGGTTGGAGCATCAGGCAAGAATGGAATGCGGCGGGACTGGCTGATAAGGAGCCAGGCCACAGGCCACATTTTTGCTCGTGCAACAAGCACGTGGGTGATGATGAACCGTAAAACAAGACGCCTTTCCAAAATGCCAGAAGAGGTGAGAGCAGAAGTTGCTCCTTGGTTTATAGAGAAGCAAGCAATAAAGGAAGATGCTCAAGAAAAAATAGTCAAATTGGATAAAGAGGCAAAATACATGAATTCTGATTTGAAGCCCAAGAGAAGTGACTTGGACATGAACCAACATGTTAATAATGTGAAGTATGTAAGATGGATGCTAGAGACCATCCCAGACCAAATTCTGGAGCGGCACCAATTATCTAGTATCACACTAGAGTACAGAAGGGAGTGTGGAAGCTCAGATATAGTTCAATCATTATGTGAACCTGAAGAGGATGAAAAACTTCATGGTGTGGTAGAACCAGATTACTGCACAAATCTTCTCAATGGGTTATCATCAGATATTATAAATGGCAGTGGTGTGCTGACTTATCTTGAGCAGAGGCCATTAAGGTATACACACCTTCTACAAATCAAAGGAGAGAAACAAAACGATGAAATTGTCCGAGGAAGGACAAGATGGAAGAGGAAGATTGTTACAATGCCATTTTCCACTTAG 1203 0.4323 MRTMVTTFSYPSSTYFVRSCSIRENHDQVKQPVNTGIRTNGSFRSPIKVETLSKIAGTTSTTLGQAVTVDENGLRQNIPTKKQLVDPHRQGLITEGGVGYRQTVVIRSYEVGADKTATLESILNLLQETALNHVWMSGLLGDGFGATHGMVRNDLIWVVSRMQVLIDYYPIWGEVVEIDTWVGASGKNGMRRDWLIRSQATGHIFARATSTWVMMNRKTRRLSKMPEEVRAEVAPWFIEKQAIKEDAQEKIVKLDKEAKYMNSDLKPKRSDLDMNQHVNNVKYVRWMLETIPDQILERHQLSSITLEYRRECGSSDIVQSLCEPEEDEKLHGVVEPDYCTNLLNGLSSDIINGSGVLTYLEQRPLRYTHLLQIKGEKQNDEIVRGRTRWKRKIVTMPFST 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02881 400 Pfam Acyl-ACP thioesterase 99 358 IPR002864 GO:0006633|GO:0016790
Phco6g02881 400 CDD 4HBT 100 216 - -
Phco6g02881 400 FunFam Acyl-[acyl-carrier-protein] hydrolase 91 395 - -
Phco6g02881 400 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 100 246 IPR029069 -
Phco6g02881 400 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 260 397 IPR029069 -
Phco6g02881 400 Coils Coil 244 264 - -
Phco6g02881 400 Gene3D Hotdog Thioesterase 92 396 - -
Phco6g02881 400 PANTHER OLEOYL-ACYL CARRIER PROTEIN THIOESTERASE 1, CHLOROPLASTIC 39 393 IPR045023 GO:0006633|GO:0016297
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02881 Phco-Chr6 49910031 49912178 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g02881 6 49910031 49912178 Phco6g02881 6 49910031 49912178 ECH