Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02863 ATGAGCAATCCCAAGGAAGAAGAACCGTTATCTAGAGCTGCAAGAGCAGCAGAAGATCTTTACCATCTTCGAGACACTTATTTTCCACCCAACTCCGATGACAGAATCTCAAAGTTGCAACACGAATCCGATCTCGCTCTTAATCTCCTCGATTCCATTCCCCCAGAACAAAGAAAATCACCTACACAACGTGCAACATTTGAATATCTTAGAGGGAAGATGTTGGATGTATTTCCTGACTATAGGAAAGAAGCTGAGGATCATCTATCAAAAGCTGTTAAGTTAAATCCATCTCTTGCAGATGCTTGGCTATGTTTAGGAAATTGCATTTGGAAAAAAGGAGATTTAACTGCTGCAAAGAACTGCCTCAGTCTTGCATTAGACAAGGGTCCTAACAAAAAGATTCTTTGTCAACTATCGATGCTTAAAAGAAAAATGTCTCAAGGTTTGGAGAATCAAGCAGAACTGGTTGAGGAAAGCATTCAACATGCCAAGGAAGCAATCACTTTAGATGTCAAGGATGGGAGCTCTTGGTATAATCTTGGAAATGCTTGCCTTACAAGTTTTTTTGTCACTGGAGCTTGGGATCATACCAAACTTTTACATTCTCTAAAAGCATATCAAAATGCTGAGAAAGATGAAAGAATGAAGTCCAATCCAGACTTATATTTTAATAGTGCTACAGTTAACAAATATCTTGAGAACTACCAGAGGGCCCTTAGTGGATTTGAGGCTGCTGCTTTAAAGGATCCAGGTCTTAATGCTGCAGAGGAGGTTCAGAAGATAGTCAGTTTACTTGACAAGGTGGACAATCTTTTGAAGGGACATGTAAGAGCTAAGCGGATGACATCTTTGGCTTCATCATTGGTTGCTGTTGATTTGAAATCGCCATACAGAAGAGTTACCATAGACCTTCTATCAGAGGGTCCAAATAGAGCTCTTGCAGTAGAGGGGAAAGTTTTGTTCTTTATTAAGACTGAAGGTGTTGCTCCCCTATACTATTTGCTTTGTGATTCAAACCAATCCTGCTTTGTTCTCTCGATTTATGGTGTGCGTACTGATGTGATTAAAGAAGGAGATCAGCTAACAATGCTTGATCCTTATTTTCGTGATGTTGATTTGTCGTGGAATGCTAAGCATTACCAGTTCAAGTCTATACGCCTGGATTTCTATGAACAAGTGCTTGTAAATGGAAAAGCTTTGACTCCTCAACAAGCAGTTCGTACGTCAATATATGCTCAACATAAACCCTGA 1254 0.3971 MSNPKEEEPLSRAARAAEDLYHLRDTYFPPNSDDRISKLQHESDLALNLLDSIPPEQRKSPTQRATFEYLRGKMLDVFPDYRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLTAAKNCLSLALDKGPNKKILCQLSMLKRKMSQGLENQAELVEESIQHAKEAITLDVKDGSSWYNLGNACLTSFFVTGAWDHTKLLHSLKAYQNAEKDERMKSNPDLYFNSATVNKYLENYQRALSGFEAAALKDPGLNAAEEVQKIVSLLDKVDNLLKGHVRAKRMTSLASSLVAVDLKSPYRRVTIDLLSEGPNRALAVEGKVLFFIKTEGVAPLYYLLCDSNQSCFVLSIYGVRTDVIKEGDQLTMLDPYFRDVDLSWNAKHYQFKSIRLDFYEQVLVNGKALTPQQAVRTSIYAQHKP 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02863 417 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 25 323 - -
Phco6g02863 417 Coils Coil 147 167 - -
Phco6g02863 417 Gene3D Tetratricopeptide repeat domain 3 276 IPR011990 GO:0005515
Phco6g02863 417 Gene3D - 277 416 IPR038645 -
Phco6g02863 417 Pfam Tetratricopeptide repeat protein 5 OB fold domain 298 409 IPR032076 -
Phco6g02863 417 SUPERFAMILY TPR-like 72 244 IPR011990 GO:0005515
Phco6g02863 417 SMART tpr_5 220 253 IPR019734 GO:0005515
Phco6g02863 417 SMART tpr_5 100 133 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02863 Phco-Chr6 49752058 49760854 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g02863 6 49752058 49760854 Phco6g02863 6 49752058 49760854 ECH