Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02858 ATGTCTGGGATGTGTTTACATTTGGGTCTGTTTCTGTGCATACTTTTTGTGTGCTGTTCAGCGACTCTGCCTTCTTCCTTCGCGTCGCGCCGTTCGATCCTTCGAGAGGTCAAGAGTGATGGTAATCATCCCGATTATGCCGTTGAACTGAACGGCACGAATTTCGATGCTGTTTTCAAAGATACCCCTGCTACTTTTGCCGTTGTTGAATTCTTTGCCCATTGGTGCCCTGCATGTAGGAATTATAAGCCACACTACGAAAAGGTTGCCAGATTATTTAATGGACCTGATGCAGTGCATCCAGGAATCATATTAATGACAAGGGTAGATTGTGCATCAAAGATAAATACTAAGCTATGTGATAAGTTTTCTGTTGGTCATTATCCTATGCTTTTCTGGAGCGCTCCTTCTAAATTTGTTGGTGGAGGTTGGGATCCTAAACAAGAGAAAAATGATATACTTGTGATTGATGATGCTCGCACAGCTGATCGGTTGCTTAGTTGGATCAACAAGCAATTGGGCAGTTCATTTGGCCTGGATGATCAGAAATTTCAAAATGAGCTCCTTTCATCCAATGTCTCAGACCCTGGACAGATTGCCAGAGCTATCTATGATGTAGAAGAGGCAACTTCTACAGCTTTTGACATCATCTTAGAGCACAAGATGATAAAACCAGAAACTCGTGCTTCACTCATTAAGTTTCTTCAGCTTTTGGCAGCTCATCATCCTTCTAGGAGATGCCGGAAGGGTACTGCTGAATTTCTTGTGAGCTTTGATGACTTGTACCCAACAGATTTTTGGTCAACTAAGCAGGAAGATGATAAGAGTTCAATTAAGAACTTCAGGATTTGTGGGAAAGATGTGCCTCGTGGATACTGGATGTTCTGCCGTGGCAGTAAGAATGAAACAAGAGGCTTCAGCTGTGGTTTATGGGTTCTTATGCATTCTCTCTCTGTGAGGATAGAGGATGGAGAGAGTCAGTTTACATTCAACGCAATATGTGATTTTGTTCACAACTTCTTCATCTGTGAGGAATGCCGACAACATTTTTACAAAATGTGTTCAAGTGTTTCTAGTCCTTTCAACACCGCCCGGGACTTCGCACTTTGGTTGTGGAGTACCCACAACCAGGTGAACGAAAGATTGTTGAAAGAAGAAGCATCTGTAGACACCGCTGACCCCAATTTTCCAAAGACAATTTGGCCACCAAATCAGCTTTGTGCTTCCTGTTACATAGTCTCTGATGAGAAGAGCAACAACAACAAAATAGAATGGAACCAAGATGAGGTGTTTAAGTTTTTGACTGATTACTACGGTAAAACACTAGCGTCTCTGTACAAGAACAGGAATATTGGAGGAAATGATGGAGCTGAAGGAGGTGTTGAAGATCTAATAGTCGCGACTAATGCAATTGTGGTGCCTGTAGGAGCTGCATTGGCTATTGCTGTTGCTAGCTGTGCTTTTGGAGCACTTGCTTGCTACTGGCGTTCACAGCAAAAGAGTCGGAAGCCTAGGAGAACGTGGAAGTAG 1530 0.4301 MSGMCLHLGLFLCILFVCCSATLPSSFASRRSILREVKSDGNHPDYAVELNGTNFDAVFKDTPATFAVVEFFAHWCPACRNYKPHYEKVARLFNGPDAVHPGIILMTRVDCASKINTKLCDKFSVGHYPMLFWSAPSKFVGGGWDPKQEKNDILVIDDARTADRLLSWINKQLGSSFGLDDQKFQNELLSSNVSDPGQIARAIYDVEEATSTAFDIILEHKMIKPETRASLIKFLQLLAAHHPSRRCRKGTAEFLVSFDDLYPTDFWSTKQEDDKSSIKNFRICGKDVPRGYWMFCRGSKNETRGFSCGLWVLMHSLSVRIEDGESQFTFNAICDFVHNFFICEECRQHFYKMCSSVSSPFNTARDFALWLWSTHNQVNERLLKEEASVDTADPNFPKTIWPPNQLCASCYIVSDEKSNNNKIEWNQDEVFKFLTDYYGKTLASLYKNRNIGGNDGAEGGVEDLIVATNAIVVPVGAALAIAVASCAFGALACYWRSQQKSRKPRRTWK 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02858 509 ProSiteProfiles ERV/ALR sulfhydryl oxidase domain profile. 299 401 IPR017905 GO:0016972
Phco6g02858 509 Pfam Thioredoxin 48 134 IPR013766 -
Phco6g02858 509 ProSiteProfiles Thioredoxin domain profile. 37 174 IPR013766 -
Phco6g02858 509 Pfam Erv1 / Alr family 308 402 IPR017905 GO:0016972
Phco6g02858 509 SUPERFAMILY Thioredoxin-like 47 174 IPR036249 -
Phco6g02858 509 FunFam Sulfhydryl oxidase 294 447 - -
Phco6g02858 509 ProSitePatterns Thioredoxin family active site. 68 86 IPR017937 -
Phco6g02858 509 Gene3D ERV/ALR sulfhydryl oxidase domain 294 446 IPR036774 GO:0016972
Phco6g02858 509 FunFam Sulfhydryl oxidase 35 202 - -
Phco6g02858 509 PANTHER QUIESCIN Q6-RELATED SULFHYDRYL OXIDASE 10 503 IPR039798 GO:0016971
Phco6g02858 509 SUPERFAMILY FAD-dependent thiol oxidase 300 404 IPR036774 GO:0016972
Phco6g02858 509 Gene3D Glutaredoxin 37 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02858 Phco-Chr6 49719541 49724492 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g02858 6 49719541 49724492 Phco6g02858 6 49719541 49724492 ECH