Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02852 ATGGCCATTCCCTACCCCCATTTCATTGCCACCGAGAAGGCTGCCATGGACGCCGGCCTTCTCCACCCTTCCTCCTCCCCCTCCGTCATCTTCACCCAAGATGACCTTAAGAAGATCGCCGCCTACAAGGCCGTCGAATACGTTGAATCCGGCATGGTTCTCGGCCTTGGCACTGGCTCCACCGCCAAGCACGCTGTCGAACGCATCGGTGAGCTTCTCCGCCAGGGCAAACTCAAAGACATCGTCGGAATTCCCACCTCCAAGATGACCCACGAACAGGCACTCTCCCTCGGGATCCCCCTGTCCGATCTCGACTCCCACCCCGTCGTCGATCTGGCCATCGACGGCGCCGACGAGGTTGACCCTTTTCTCAACCTCGTCAAGGGTCGCGGTGGCTCCCTCCTGAGGGAGAAGATGGTCGAGAGCGCGTGCAAGAAGTTTATTGTCATTGTTGATGAGTCCAAGCTTGTCAACCATGTTGGGGGAAGTGGATTGGCCATGCCCGTTGAGGTTATTCCGTTTTGTTGGAGGTTCTCTGCTGAGAGGTTGCGCAAGCTGTTTGAGGAGGCTGGGTGTGTTGCCAAGCTTAGGACTTTTGGGGAGAAGGAGGAGCCCTTTGTCACGGACAATGGGAACTTCATTGTGGATTTGTACTTCGAAAGGAGTATTGGGGATTTGAAGGCTGCCAGTGACGCAATTCTGCAGCTTGCTGGGGTGGTGGAGCATGGCATGTTTCTGGACATGGCTACCACTGTTATTGTGGCAGGGGAGCTGGGCTTGACGGTGAAGAATAAGTAG 798 0.5589 MAIPYPHFIATEKAAMDAGLLHPSSSPSVIFTQDDLKKIAAYKAVEYVESGMVLGLGTGSTAKHAVERIGELLRQGKLKDIVGIPTSKMTHEQALSLGIPLSDLDSHPVVDLAIDGADEVDPFLNLVKGRGGSLLREKMVESACKKFIVIVDESKLVNHVGGSGLAMPVEVIPFCWRFSAERLRKLFEEAGCVAKLRTFGEKEEPFVTDNGNFIVDLYFERSIGDLKAASDAILQLAGVVEHGMFLDMATTVIVAGELGLTVKNK 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02852 265 FunFam Ribose-5-phosphate isomerase A 36 169 - -
Phco6g02852 265 Pfam Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 82 257 IPR004788 GO:0004751|GO:0009052
Phco6g02852 265 Gene3D - 159 243 - -
Phco6g02852 265 NCBIfam ribose 5-phosphate isomerase A 36 259 IPR004788 GO:0004751|GO:0009052
Phco6g02852 265 SUPERFAMILY NagB/RpiA/CoA transferase-like 32 216 IPR037171 -
Phco6g02852 265 Hamap Ribose-5-phosphate isomerase A [rpiA]. 33 263 IPR020672 GO:0004751|GO:0009052
Phco6g02852 265 PANTHER RIBOSE-5-PHOSPHATE ISOMERASE 3, CHLOROPLASTIC-RELATED 22 264 - -
Phco6g02852 265 CDD RPI_A 36 256 IPR004788 GO:0004751|GO:0009052
Phco6g02852 265 SUPERFAMILY D-ribose-5-phosphate isomerase (RpiA), lid domain 165 246 - -
Phco6g02852 265 Gene3D - 36 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02852 Phco-Chr6 49694523 49695320 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g02852 6 49694523 49695320 Phco6g02852 6 49694523 49695320 ECH