Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02831 ATGGATAGCGAAAAAATAGCCTCAGACAATGGTCGCAAACCAAGGATTCTCAACTGTCACCTAGAGGGAGAGAGAAAAGAGGGAGCGTGTTTGGTTCCAAACAGCACTGGAGAAATGACTAAAGAAGAAGACTTTAAGCTCCTTAAAATCCAGACTTGTGTTCTCAAAGTTAACATTCACTGTGATGGGTGTAAGCACAAAGTGAAGAAACTCCTTCAGAGAATTGAAGGTGTTTATCAAGTTCAAATAGATGCAGAACAGCAAAAAGTAACGGTTTCAGGCAGTGTGGATTCTGCAACCTTGATCAAGAAACTGGTGAGAGCTGGCAAATATGCCGAGCTCTGGTCTCAGAAAACAAATCAGAACCAAAAGCAGAAGAACAACAATGCCAAGGATGACAAGAACAAAGGACAAAAGCAAGCCCTTGTCAAGGGGCTTGATGCCTTCAAGAACCAGCAGAAGTTTCCTGCTTTTAGTTCTGAAGAGGATGAATACTACTCTGAATATGATGATGAAGATGAGGACGAAGATGAAGAAATGCGGTTTCTCAGGGAGAAAGCCAATCAGCTGCAGATGCTGAAGCAGCAAGCAGCTAATGCAAATAATGTGAGAAAAAATATGGGGACCATAGGAGCTGGTGCCATCAATGGTAAGATGAACAATGGTGGTGGCAATGCCGGTAATGGCAAGAAAGGAGGCCCAAATCCGAATATGGGAGTGAAGGAGAGTCCTAATGGGGGCCTTGATCAAAAAACAATGGCAGCCCTGAAACTGAACGCTGGCCATCTGGGTGGTGAAGGCCTTAACCTCAATCTTGGTGAAGCCAAAAGGGCCAATGACATTGGTGCCATGATGAATATGGCTGGTTTTAATGGTAACGGGGGTAATGTTAGTAGTGCCACTGTTCTTGGGGCTAATAATTCCAATGCCATGGGAGGTTTTCCTGTTCAGTCCAATAATATGATTCCAGGGTCCTCTGCAGCTTTTTCAAATGGTGGTATAACTGGCCAATATCCATCTTCTCTGCTGATGAACATGAATGCCTTCAATAACCATCCATCCCCATCTCCATTGATGATGAACATGAACATGCAGGCTAGACAAGCCATGCAGCAACAGCCCCAGATGATGTATCACAGGTCTCCCATGATTCCCACCAACACTGGCTATTACTACAACAACCATAGTAATAGCTACAGTCCTGCACAATACTCCTATTCCTATGGCTTGCCTAGTTACCCTGGAGGTGATAATCACTCTGCAGCTCACATGTTCAGTGATGACAATACCAACAGCAGTTGTTCAATAATGTAA 1314 0.4406 MDSEKIASDNGRKPRILNCHLEGERKEGACLVPNSTGEMTKEEDFKLLKIQTCVLKVNIHCDGCKHKVKKLLQRIEGVYQVQIDAEQQKVTVSGSVDSATLIKKLVRAGKYAELWSQKTNQNQKQKNNNAKDDKNKGQKQALVKGLDAFKNQQKFPAFSSEEDEYYSEYDDEDEDEDEEMRFLREKANQLQMLKQQAANANNVRKNMGTIGAGAINGKMNNGGGNAGNGKKGGPNPNMGVKESPNGGLDQKTMAALKLNAGHLGGEGLNLNLGEAKRANDIGAMMNMAGFNGNGGNVSSATVLGANNSNAMGGFPVQSNNMIPGSSAAFSNGGITGQYPSSLLMNMNAFNNHPSPSPLMMNMNMQARQAMQQQPQMMYHRSPMIPTNTGYYYNNHSNSYSPAQYSYSYGLPSYPGGDNHSAAHMFSDDNTNSSCSIM 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02831 437 CDD HMA 54 113 IPR006121 GO:0046872
Phco6g02831 437 Pfam Heavy-metal-associated domain 55 108 IPR006121 GO:0046872
Phco6g02831 437 FunFam Copper transport protein ATOX1 49 118 - -
Phco6g02831 437 MobiDBLite consensus disorder prediction 118 138 - -
Phco6g02831 437 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED 44 437 - -
Phco6g02831 437 MobiDBLite consensus disorder prediction 221 247 - -
Phco6g02831 437 SUPERFAMILY HMA, heavy metal-associated domain 50 116 IPR036163 GO:0046872
Phco6g02831 437 Coils Coil 120 140 - -
Phco6g02831 437 ProSiteProfiles Heavy-metal-associated domain profile. 50 113 IPR006121 GO:0046872
Phco6g02831 437 Coils Coil 180 203 - -
Phco6g02831 437 Gene3D - 50 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02831 Phco-Chr6 49530275 49533795 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g02831 6 49530275 49533795 Phco6g02831 6 49530275 49533795 ECH