Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02134 ATGACTGACATCACTGACGATGTCGCTGAGGAAATCTCCTTCCAGAGCTTCGACGATGACTGCAGGTTGCTCGGGAATCTCCTCAATGACATTCTTCAGCGCGAGGTTGGCACCAACTTAGTTGACAAACTCGAAAGGATTCGAGTCCTTGCTCAGAGTGGTTGTAATATGAGGCAGGCTGGTATTTTGAACATGGCAGAGCTGCTTGAGAAGCAGTTGGCTTCAGAGTTGTCAAAGATGACACTAGAAGAAGCTTTTACCCTTGCTCGTGCCTTCAGCCACTATCTTACTTTGATGGGCATAGCTGAGACTCATCACAGGGTTCGTAAAGGAGGGAATATGGCACAAATTGCAAAATCTTGCGATGATATATTTAACCAGCTGGTGCAGGGTGGAGTTCCCCCAGAAAAACTTTATGACACAGTCTGCAAGCAGGAGGTTGAAATTGTTCTCACGGCTCATCCCACACAGATTAACCGTCGAACCTTACAATTCAAACACGTTAGAATTGCTCATCTTTTGGATTATAATGATCGACCTGATCTTAGCACTGAAGATCGAGAAATGGTGATTGAAGATCTGGTGAGAGAGATAACTTCAATATGGCAGACAGATGAACTAAGGCGCCAAAAGCCCACTCCAGTTGATGAAGCTAGAGCTGGTTTCAACATTGTGGACCAGTCACTATGGAAAGCTGTCCCTCATTACTTACGACGTGTCAGCAATGCTCTAAAGAAGCATACAGGAAAGCCACTTCCCTTGACCTGTACTCCCATAAAGTTTGGATCTTGGATGGGAGGTGATAGAGATGGAAACCCAAATGTGACAGCAAAGGTCACAAAAGATGTTTCACTTCTATCTAGATGGATGGCAATTGATCTCTATATCCGGGAAGTGGACAGCCTTAGATTTGAGCTATCCATGAACCAGTGCAGTGATAGGTTGTCAAGACTGGCACATGACATTCTAGAAGCTAAACATGAGAATCCCCGCGAGAATTGGAACCAATCTGTGAATAGAAGTCCTGCACTCCCAACACAACTTCCAGCTAGAGCTCATTTACCTTCTATTGCTGAAAATGGTGAATCTCGGCATCCTAGACTAGACATTCCAGGACCTGATTACATGCAATCTAATCACAAGGATGGTGGGGCTGCCTTAAGTTCAAATACATCAAAAAATGCCAATCCCAATATTCAATTATCAGGAACAAGTTCAGCAAATTCCAGTGCTTCTTCAGCTGGAATTTCATCTTCTTTTGGTCAAAAGAAATTGTATGCGGAACCCCAGACAGGAAAGTCCACTTTTCAGAAGCTTTTAGAGCCAATGCTTCCTCAACTTCCTGGTATTGCTCCTTATAGAATTGTCCTGGGGAATGTTAAGGATAAGCTTGAGAGAAGTCGTAGACGATTAGAACTACTTCTTGAGGATGTCGCATGTGACTATGATCCTTTGGAGTACTATGAAACATCTGATCAGCTTTTGGAACCTCTGCTTCTCTGTTACGAATCTCTGCAATCATGTGGATCTGGGGTGCTAGCTGATGGTCGGCTTGCTGATCTGATTCGTAGAGTTGCTACCTTTGGAATGGTGTTAATGAAGCTTGACTTGCGTCAGGAATCTGGGAGACATGCAGAAGCACTTGATGCAATAACAGAGTATTTAGATATGGGTACTTACAGTGAATGGGATGAAGAAAAGAAGTTGGACTTTTTAATAAAAGAACTGAAAGGGAAGAGACCTCTAGTTCCAGTTAGTATAGAGGTTCCTTCTGATGTGAAAGAAGTCTTGGATACATTCCGAATTGCTGCTGAACTAGGGAGTGATTCACTAGGAGCTTATGTGATCTCTATGGCCTCAAACGCAAGTGACGTCCTTGCAGTAGAACTTTTACAGAAGGATGCACGGCTTGCTGCTATTGGTGAGTTGGGAAAAGCATGTCCTGGTGGAACGTTGCGAGTAGTACCTCTGTTTGAAACTGTGAAAGACCTGAGAGAAGCTGGTTCAGTTATCCGACAACTTTTATCAATAGACTGGTACCATGAACACATCATTAAAAACCATAATGGACATCAAGAGGTTATGGTTGGATATTCTGATTCAGGCAAAGACGCTGGTCGCTTTACCGCTGCCTGGGAACTTTTCAAAGCTCAGGAGGATGTTGTAGCTGCATGCAATGATTATGGTATAAAGGTTACACTATTCCACGGCCGTGGAGGCAGTATTGGTCGTGGTGGAGGGCCTACATATCTGGCTATTCAATCCCAGCCCCCTGGGTCTGTGATGGGAACGCTTCGGTCTACTGAGCAGGGAGAGATGGTGGAGGCCAAGTTTGGGTTGCCACAAATAGCTGTTAGACAACTTGAGATATATACAACAGCAGTGCTACTTGCAACCCTTCGTCCTCCTATTCCACCTCGAGAAGAAAAATGGCGTAATGTGATGGAAGAGATCTCAAACATCAGTTGCCAGTGTTACCGCAATGTAGTGTATGAAAATCCAGAATTCCTGGCCTACTTCCATGAAGCCACACCAGAGGCAGAACTTGGGTTCCTTAACATAGGTAGCCGGCCTGCAAGAAGGAAGAGCTCAAGAGGAATTGGACACCTTCGTGCAATTCCCTGGCTGTTTGCATGGACACAAACGAGATTTGTTCTTCCAGCATGGCTTGGAGTTGGAGCAGGTTTAAAAGGAGCTTGCGAGAAAGGTCTCACGGAAGATCTAAAAGCCATGTACAAAGAATGGCCATTCTTCCAAAGTACTATAGACCTGATTGAGATGGTTTTGGGGAAAGCAGACATTCCTATAGCCAAGCACTATGATGAAGTCCTTGTGTCACAGGAGAGGCAAGAGCTTGGTGGCGAACTAAGAAGTGAGCTCATGACAGCTGAAAAGTTTGTACTAGTGATTAGTGGGCACGAGAAACTTCAGCAGAACAATAGGAGCTTGAGGAGGCTGATTGAGAATAGACTTCCCTTTCTCAATCCCTTGAACATGTTGCAGGTGGAGATACTGAAGAGGTTGAGACGTGATGATGACAACCGTAAAATCAGAGATGCTTTGCTTATCACCATAAATGGGATTGCTGCAGGGATGAAGAATACAGGTTGA 3111 0.4452 MTDITDDVAEEISFQSFDDDCRLLGNLLNDILQREVGTNLVDKLERIRVLAQSGCNMRQAGILNMAELLEKQLASELSKMTLEEAFTLARAFSHYLTLMGIAETHHRVRKGGNMAQIAKSCDDIFNQLVQGGVPPEKLYDTVCKQEVEIVLTAHPTQINRRTLQFKHVRIAHLLDYNDRPDLSTEDREMVIEDLVREITSIWQTDELRRQKPTPVDEARAGFNIVDQSLWKAVPHYLRRVSNALKKHTGKPLPLTCTPIKFGSWMGGDRDGNPNVTAKVTKDVSLLSRWMAIDLYIREVDSLRFELSMNQCSDRLSRLAHDILEAKHENPRENWNQSVNRSPALPTQLPARAHLPSIAENGESRHPRLDIPGPDYMQSNHKDGGAALSSNTSKNANPNIQLSGTSSANSSASSAGISSSFGQKKLYAEPQTGKSTFQKLLEPMLPQLPGIAPYRIVLGNVKDKLERSRRRLELLLEDVACDYDPLEYYETSDQLLEPLLLCYESLQSCGSGVLADGRLADLIRRVATFGMVLMKLDLRQESGRHAEALDAITEYLDMGTYSEWDEEKKLDFLIKELKGKRPLVPVSIEVPSDVKEVLDTFRIAAELGSDSLGAYVISMASNASDVLAVELLQKDARLAAIGELGKACPGGTLRVVPLFETVKDLREAGSVIRQLLSIDWYHEHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELFKAQEDVVAACNDYGIKVTLFHGRGGSIGRGGGPTYLAIQSQPPGSVMGTLRSTEQGEMVEAKFGLPQIAVRQLEIYTTAVLLATLRPPIPPREEKWRNVMEEISNISCQCYRNVVYENPEFLAYFHEATPEAELGFLNIGSRPARRKSSRGIGHLRAIPWLFAWTQTRFVLPAWLGVGAGLKGACEKGLTEDLKAMYKEWPFFQSTIDLIEMVLGKADIPIAKHYDEVLVSQERQELGGELRSELMTAEKFVLVISGHEKLQQNNRSLRRLIENRLPFLNPLNMLQVEILKRLRRDDDNRKIRDALLITINGIAAGMKNTG 1036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02134 1036 Hamap Phosphoenolpyruvate carboxylase [ppc]. 9 1036 IPR022805 GO:0006099|GO:0008964|GO:0015977
Phco6g02134 1036 ProSitePatterns Phosphoenolpyruvate carboxylase active site 1. 150 161 IPR018129 -
Phco6g02134 1036 FunFam Phosphoenolpyruvate carboxylase 4 289 373 - -
Phco6g02134 1036 Coils Coil 457 481 - -
Phco6g02134 1036 ProSitePatterns Phosphoenolpyruvate carboxylase active site 2. 694 706 IPR033129 -
Phco6g02134 1036 MobiDBLite consensus disorder prediction 382 414 - -
Phco6g02134 1036 FunFam Phosphoenolpyruvate carboxylase 1 417 531 - -
Phco6g02134 1036 Gene3D Phosphoenolpyruvate/pyruvate domain 398 530 - -
Phco6g02134 1036 Gene3D Phosphoenolpyruvate/pyruvate domain 289 369 - -
Phco6g02134 1036 MobiDBLite consensus disorder prediction 356 414 - -
Phco6g02134 1036 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 4 1036 IPR021135 GO:0006099|GO:0008964|GO:0015977
Phco6g02134 1036 Pfam Phosphoenolpyruvate carboxylase 450 1036 IPR021135 GO:0006099|GO:0008964|GO:0015977
Phco6g02134 1036 Pfam Phosphoenolpyruvate carboxylase 19 330 IPR021135 GO:0006099|GO:0008964|GO:0015977
Phco6g02134 1036 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 19 1036 IPR015813 GO:0003824
Phco6g02134 1036 PRINTS Phosphoenolpyruvate carboxylase signature 149 162 IPR021135 GO:0006099|GO:0008964|GO:0015977
Phco6g02134 1036 PRINTS Phosphoenolpyruvate carboxylase signature 261 276 IPR021135 GO:0006099|GO:0008964|GO:0015977
Phco6g02134 1036 PRINTS Phosphoenolpyruvate carboxylase signature 202 218 IPR021135 GO:0006099|GO:0008964|GO:0015977
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02134 Phco-Chr6 42036856 42045058 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g02134 6 42036856 42045058 Phco6g02134 6 42036856 42045058 ECH