Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02124 ATGCTGGTTCGGAGGAGGGTGATGAGTTGGAGGAGGGTGGCGAAGGCCCTGCAAGCTCTGGTGGCTCATGCTTTACTTTTCTCCTTCACTCTTCTCCTTGCTCTCAAGCTTGACCGTCTCCTTCCTGACTCATGGACATGGTGGAAAGTATTTTCTCCTCTATGGCTTTTCCATGCTGTGGTGGCACGAGGCAGGTTTTCCTTGCCCGCTCCTTCGATCCCTCATGATCGCCGATGGGCTCCTTTTCATTCCCTCGTAGCAACTCCACTACTTGTTGCATTTGAGCTACTTCTTTGTATACATCTCGGAAGCAGTTATGTGATGAATTTAAGGATTGTCTTCATGCCCCTGGTATTTTTTGAAATGGTGGTTTTGTTTGATAACATCAGGATGTGTAGGGCTTTGATGCCTGGGGATGACGAAAATTTGACTGATGAAGCAGTATGGGAAACACTTCCTCACTTCTGGATTTCAATATCCATGGTCTTCTTGATTGCTGCCACAGTGTTCACGCTTCTAAAGATATGTGGTGATGTTGCTGCTCTAGGCTGGTGGGACTTATTTATTAACTATGGGATTGCACAGTGCTTTGCCTTTCTTGTTTGTACTAAGTGGCACAATCCAACTATTCATGGAGGTTGTCATATCACAGAACCATGTTCTTCATCAAATACCATAAGATACCTAGACATGAGTAGAGGAGGCTTAGTTATTTATACAGATGAAGATAGGCAACAAAATGGGTTCTGCAATCTGCAGGATATTGGGGGGCATATCATGAAAATTCCATTCATTGGTTTTCAAATACTTCTTTTTATGCATTTAGAGGGAACACCATCCAGTGCAAAAAATCTGCGACATTGGGTCATTTTTTCACCACTTTTTTTGTTGCAAGGAGCTGGAGTTTTATTTGCTGCATATAGATTAATAGAGAAGATAGTTCTTTTACTCTACAGTGGAGATATTCCTGAAAGATACTCAGCTATAGCATCAAAATCTCGTGAGTGCTTCGGGTTCTTTCGACATGGGTCAAGGTTACTTGGTTGGTGGTCAATAGATGAAGGAAGTAAAGAGGAAGAAGCTAGACTTTTTTTTTCTGGGAGTTCTGGGTATAATACTTTTACCCCTGATACAGTGAAGAAAATGCCTAGAGCAGATCTGGTTGAGGAGATTTGGAGACTACAAGCTGCACTGGGTGAGCAGACAGAAGTTACAAAATTTAGCCAAGAGGAGTATGAAAGGCTTCAACATGAGAAGATCTTATGTAGAATTTGCTTCGAAGAGCAGATTAACGTGGTCCTCCTCCCTTGTAGGCATCACATTATTTGCAGCACTTGCTGCGATAAATGTAAAAGGTGCCCTGTCTGCCGTGGCACCATTGAAGAAAGGATGCCTGTATATGATGTGTAG 1410 0.4277 MLVRRRVMSWRRVAKALQALVAHALLFSFTLLLALKLDRLLPDSWTWWKVFSPLWLFHAVVARGRFSLPAPSIPHDRRWAPFHSLVATPLLVAFELLLCIHLGSSYVMNLRIVFMPLVFFEMVVLFDNIRMCRALMPGDDENLTDEAVWETLPHFWISISMVFLIAATVFTLLKICGDVAALGWWDLFINYGIAQCFAFLVCTKWHNPTIHGGCHITEPCSSSNTIRYLDMSRGGLVIYTDEDRQQNGFCNLQDIGGHIMKIPFIGFQILLFMHLEGTPSSAKNLRHWVIFSPLFLLQGAGVLFAAYRLIEKIVLLLYSGDIPERYSAIASKSRECFGFFRHGSRLLGWWSIDEGSKEEEARLFFSGSSGYNTFTPDTVKKMPRADLVEEIWRLQAALGEQTEVTKFSQEEYERLQHEKILCRICFEEQINVVLLPCRHHIICSTCCDKCKRCPVCRGTIEERMPVYDV 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02124 469 ProSiteProfiles Zinc finger RING-type profile. 422 457 IPR001841 -
Phco6g02124 469 Pfam Transmembrane Fragile-X-F protein 36 297 IPR019396 -
Phco6g02124 469 PANTHER TRANSMEMBRANE FRAGILE-X-F-ASSOCIATED PROTEIN 8 469 - -
Phco6g02124 469 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 397 468 IPR013083 -
Phco6g02124 469 SUPERFAMILY RING/U-box 412 464 - -
Phco6g02124 469 Pfam Zinc finger, C3HC4 type (RING finger) 420 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02124 Phco-Chr6 41836082 41844269 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g02124 6 41836082 41844269 Phco6g02124 6 41836082 41844269 ECH