Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02111 ATGTATTTCTTCACTGAGAAAATACAGCGTTTGAAGATGGGCTTTCCTGACTACATCCAGGCATTGGAAGAAGAACGCCGTAAGATTCAGGTGTTCTGCAAAGAGCTTCCTCTTTCTTTGGAACTAGTTACTCAAGCCATTGAAGCTTGCAAACAACAATTGTCTGGTACCACGAGCGAGTATAATTTGAATGGTCAATCGGAGTGTTCGGAGCGGACAACATCAACGGAGGGACCAGTTTTGGAGGAGTTCATTCCAATCAAGAAAAGGGCATCATCACCCCCTTGTTGCGATGAAGATGATGAAGACAATGAACAGCATTCTCTCAAGCAAAGCGTTTTGAATGAGAATAATGACAGTGATAAGAGGAAATCCGACTGGCTTAGATCTGTTCAGTTGTGGAATCCAGATCCCCCAGCTGAGGAGGATGCGACTAGGAAAGTTCCTGGGATGGAATTGAAGAGAAGTGGAAGTAGTGGTGGTGCTTTCCACCCATTCCACAAGGAAGAAAGAGCTGCAAAGGCAACTGAATCATTGTGTAAAGCACCCTCTTCAACCCGGGTAGCTGCTGCGAGTTCTAGCGCCGGAGAACTCACCCCAGAAAAAAATCTGAACGAGGGACAGAGAAAGCAGCGCAGGTGCTGGTCTCAGGACTTGCATAAGCGCTTCTTGCATGCCCTTCAGCAACTTGGGGGTGCAGATTCTGCCACACCAAAACAAATCAGAGAGCTAATGAATGTTGATGGCCTCACCAATGATGAAGTCAAAAGCCATTTACAGAAATACCGTTTGCACACTAGAAGGCCAAGTCCCATGGTTCACAACAGTTCCAGTCCACAAGCAGCGCCTTTTGTCCTTGTAGGGAACATTTTTGTTCAGTCACCAGAATATGCAGCTGTAGCCACCTCAACAGCATCAAGAGAAGTGCTCACAGTTGCAGCACCTGCTGGAGTTTATGCACCAGTGGCCACACATCCTACACCTGTTTCACAACCATCAGCTGATTCAATTAAGAAGCCACAGTTTAAGAAATTTCAGCATTCTGAACATTCAAATTCAGATGAAAGGGCTCATCACAGTGAAGGAGCTGTCCATTCAAATTCCCCTACCTCATCCACCTCTACACACACCTCTACTTCCCCTGGTTCTTAA 1152 0.4618 MYFFTEKIQRLKMGFPDYIQALEEERRKIQVFCKELPLSLELVTQAIEACKQQLSGTTSEYNLNGQSECSERTTSTEGPVLEEFIPIKKRASSPPCCDEDDEDNEQHSLKQSVLNENNDSDKRKSDWLRSVQLWNPDPPAEEDATRKVPGMELKRSGSSGGAFHPFHKEERAAKATESLCKAPSSTRVAAASSSAGELTPEKNLNEGQRKQRRCWSQDLHKRFLHALQQLGGADSATPKQIRELMNVDGLTNDEVKSHLQKYRLHTRRPSPMVHNSSSPQAAPFVLVGNIFVQSPEYAAVATSTASREVLTVAAPAGVYAPVATHPTPVSQPSADSIKKPQFKKFQHSEHSNSDERAHHSEGAVHSNSPTSSTSTHTSTSPGS 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02111 383 MobiDBLite consensus disorder prediction 93 109 - -
Phco6g02111 383 MobiDBLite consensus disorder prediction 340 362 - -
Phco6g02111 383 MobiDBLite consensus disorder prediction 190 209 - -
Phco6g02111 383 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 15 347 IPR044787 GO:0003700|GO:0006355
Phco6g02111 383 Gene3D - 209 267 - -
Phco6g02111 383 MobiDBLite consensus disorder prediction 363 383 - -
Phco6g02111 383 SUPERFAMILY Homeodomain-like 208 268 IPR009057 -
Phco6g02111 383 MobiDBLite consensus disorder prediction 322 383 - -
Phco6g02111 383 FunFam Myb family transcription factor 209 267 - -
Phco6g02111 383 NCBIfam myb-like DNA-binding domain, SHAQKYF class 210 265 IPR006447 GO:0003677
Phco6g02111 383 MobiDBLite consensus disorder prediction 90 164 - -
Phco6g02111 383 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 207 267 IPR017930 -
Phco6g02111 383 Pfam Myb-like DNA-binding domain 212 263 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02111 Phco-Chr6 41634566 41636346 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Phco6g02111 Myb_DNA-binding 3e-06 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g02111 6 41634566 41636346 Phco6g02111 6 41634566 41636346 ECH