Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g01544 ATGAGATTGTACCTTCTTTTTGAAGTCTCTTTTGGGTTTAGAGTGGGAGCATCAATGGCTGTGTTCATGGCAATTGTAGGTGTAGTGCTGGTGCTCTGTTTTTGCTCTGCTCTCTTGAGGTGGAATGAAGTAAGGTACAGGAAGAAAGGTTTGCCTCCTGGCACAATGGGTTGGCCAGTTTTTGGGGAGACAACTGAGTTTCTCAAGCAGGGTCCAAACTTCATGAAAAACCAGAGAGCAAGGTATGGCAGTTTTTTCAAATCCCACATACTTGGTTGTCCTACCATTGTGTCCATGGATCCAGAGCTTAATAGATACATCCTAATGAATGAGGCAAAAGGTCTTGTTCCTGGATACCCTCAATCCATGTTAGATATCTTAGGCAAATGTAACATTGCAGCTGTTCATGGCTCCACCCACAAGTACATGAGAGGAGCACTTCTTTCCATCATTAGCCCCACCTTGATCAGAGATCAGATTTTACCAAAAATTGATGAGTTCATGAGAGCCCACCTTAGCAACTGGGATAACAAAGTCATCAACATTCAAGAGAAAACCAAGGAGATGGCCTTCCTCTCATCTCTCAAGCAGATTGCTGGCAAAGAATCTGTCTCATTATCTGACTCATTCATGACAGAGTTCTTTAAGCTCGTTCTAGGAACCATTTCTCTCCCTATTAACCTTCCTGGGACAAATTACCACCGTGGATTCCAGGCAAGGAAGACTATGGTCAACGTTCTGAGTAAGCTACTAGAGGAAAGAAGAGCATCCAATGAAACCTACCATGACATGCTCGGTTGCTTGATGGCAAGAGAGGAAAATAGATACAAACTAAGTGATGAAGAAATCATTGATCTGGTGATAACAGTGATATATTCTGGTTATGAAACTGTTTCAACTACATCAATGATGGCAGTGAAGTACCTCCATGACCATCCCAAAGCTCTTGAAGAACTGATAAAAGAGCATTTGGCCATAAGAGAGAGGAAAAACCCGGATGAGGCAATTGACTGGAATGACCTCAAGTCAATGAGTTTTACCCGTGCGGTGATTTTTGAGACCTCTAGATTGGCGACAATAGTTAATGGGGTCCTAAGGAAAACCACTGAAGACATGGAACTAAACGGCTATTTGATTCCCAAAGGATGGAGAATATATGTGTATACAAGAGAGATCAACTATGACCCTTTTCTGTATCCTGATCCTCTGACTTTCAACCCATGGAGATGGCTGGATAAGAGTCTAGAATCCAAAAACTACTTCTTGATATTTGGAGGAGGCACCAGACTTTGTCCAGGAAAAGAGTTGGGAATAACAGAAATTTCCACTTTCTTACACTACTTTGTAACCAGATACAGGTGGGAAGAAGTGGGAGGAGATAAACTAATGAAATTTCCTAGAGTTCAGGCACCTAATGGACTGCACATAAGGGTGACATCTTACTAA 1446 0.4212 MRLYLLFEVSFGFRVGASMAVFMAIVGVVLVLCFCSALLRWNEVRYRKKGLPPGTMGWPVFGETTEFLKQGPNFMKNQRARYGSFFKSHILGCPTIVSMDPELNRYILMNEAKGLVPGYPQSMLDILGKCNIAAVHGSTHKYMRGALLSIISPTLIRDQILPKIDEFMRAHLSNWDNKVINIQEKTKEMAFLSSLKQIAGKESVSLSDSFMTEFFKLVLGTISLPINLPGTNYHRGFQARKTMVNVLSKLLEERRASNETYHDMLGCLMAREENRYKLSDEEIIDLVITVIYSGYETVSTTSMMAVKYLHDHPKALEELIKEHLAIRERKNPDEAIDWNDLKSMSFTRAVIFETSRLATIVNGVLRKTTEDMELNGYLIPKGWRIYVYTREINYDPFLYPDPLTFNPWRWLDKSLESKNYFLIFGGGTRLCPGKELGITEISTFLHYFVTRYRWEEVGGDKLMKFPRVQAPNGLHIRVTSY 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco5g01544 481 PRINTS E-class P450 group I signature 282 299 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco5g01544 481 PRINTS E-class P450 group I signature 388 412 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco5g01544 481 PRINTS E-class P450 group I signature 431 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco5g01544 481 PRINTS E-class P450 group I signature 421 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco5g01544 481 PRINTS E-class P450 group I signature 79 98 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco5g01544 481 PRINTS E-class P450 group I signature 348 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco5g01544 481 SUPERFAMILY Cytochrome P450 45 479 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco5g01544 481 CDD CYP90-like 78 479 - -
Phco5g01544 481 FunFam Cytochrome P450 85A1 42 480 - -
Phco5g01544 481 Pfam Cytochrome P450 52 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco5g01544 481 PANTHER CYTOCHROME P450 26 48 459 - -
Phco5g01544 481 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 424 433 IPR017972 GO:0005506|GO:0016705
Phco5g01544 481 PRINTS P450 superfamily signature 431 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco5g01544 481 PRINTS P450 superfamily signature 293 310 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco5g01544 481 PRINTS P450 superfamily signature 349 360 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco5g01544 481 PRINTS P450 superfamily signature 422 431 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco5g01544 481 Gene3D Cytochrome P450 42 480 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco5g01544 Phco-Chr5 51314597 51319195 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco5g01544 5 51314597 51319195 Phco3g02958 3 55942465 55946885 PCT