Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g01328 ATGTGTGTGGATGTGGATATGTGGGTCTGTGTGTGTGAAGGCGAAGGAAGATTGAACAAAATGTACACTTCGAGGAAGAAAATTCACAAGGACAAGGATGCAGAGCCCACTGAATTTGAGGAGACAGTTGCACAGTACTTATTTGACTTGGAGAATACCAACCAGGAGCTGAAAAGTGACTTGAAGGATCTCTATATAAATCAAGCAATTCAAATGGATGTTGCGAATAATCGCAAGGCTGTAGTCATCTATGTGCCTTTCAGATTGAGCAAAGCATTCCACAAGATTCATCTCCGACTTGTCAGAGAGTTGGAAAAGAAATTTAGCGGGAAGGATGTTATTTTGATTGCCACAAGGAGGATCTTGCGGCCACCAAAGAAGGGCTCTGCCATTCAGCGTCCCCGGACCCGGACATTGACTGCTGTCCATGACGCCATGCTAGAGGATGTTGTGTATCCTGCAGAGATTGTTGGCAAAAGGGCCAGATATAGAATTGATGGGTCAAAAATTATGAAGGTTTTCTTGGATCCCAAGGAGCGCAATAACACCGAGTACAAGCTGGAGACTTTTTCTGGAGTTTACAGGAAGCTTACTGGAAAAGATGTAGTATTTGATTATCCAGTCACAGAAGCCTGA 636 0.4387 MCVDVDMWVCVCEGEGRLNKMYTSRKKIHKDKDAEPTEFEETVAQYLFDLENTNQELKSDLKDLYINQAIQMDVANNRKAVVIYVPFRLSKAFHKIHLRLVRELEKKFSGKDVILIATRRILRPPKKGSAIQRPRTRTLTAVHDAMLEDVVYPAEIVGKRARYRIDGSKIMKVFLDPKERNNTEYKLETFSGVYRKLTGKDVVFDYPVTEA 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco5g01328 211 ProSitePatterns Ribosomal protein S7e signature. 99 112 IPR000554 GO:0003735|GO:0005840|GO:0006412
Phco5g01328 211 Pfam Ribosomal protein S7e 27 206 IPR000554 GO:0003735|GO:0005840|GO:0006412
Phco5g01328 211 PANTHER 40S RIBOSOMAL PROTEIN S7 21 210 IPR000554 GO:0003735|GO:0005840|GO:0006412
Phco5g01328 211 Coils Coil 47 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco5g01328 Phco-Chr5 48259923 48264152 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco5g01328 5 48259923 48264152 Phco4g03694 4 56568861 56571637 ECH
Phco5g01328 5 48259923 48264152 Phco5g01328 5 48259923 48264152 ECH