Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g00326 ATGGAGGAAGTTGATCCAATACCAAAGTCTCTGATGGAAAATCTCCTTGGCCTTTTGAGGGTTCGCGTGAAGCGTGGTGTCAACCTTGCCGTTCGTGATGTCCGAAGCAGCGACCCTTATGTTGTCATCAAGATGTTCAATCAGAAACTAAAGACCCGTTTCATTAGAAAGGATGTGAATCCTGAGTGGAATGAAGACCTTACGCTTTCTATTATAGATCCGAATCATCAAGTTAAACTGATCGTGTATGACCATGACACCTTTAGCAAAGATGACAGAATGGGAGATGCAGAATTTGACATCTTTCCCTTTATAGAAGCCTTGAAGAGCAACTTAACTGACATTCCAAATGGTACTGTAATCAAAAGAACACAACCAAGCCCGGAGAACTTCCTGGCTGATGAGAGCTGCATCACTTATGTCAATGGCAAGCTTGTCCAAGATATGATCCTTAGATTGCAAAATGTGGAATGTGGTGAAGTGGAAATTCAATTGCAGTGGATTGATCTTCCTGGTTCTAAGGGTATATGA 531 0.42 MEEVDPIPKSLMENLLGLLRVRVKRGVNLAVRDVRSSDPYVVIKMFNQKLKTRFIRKDVNPEWNEDLTLSIIDPNHQVKLIVYDHDTFSKDDRMGDAEFDIFPFIEALKSNLTDIPNGTVIKRTQPSPENFLADESCITYVNGKLVQDMILRLQNVECGEVEIQLQWIDLPGSKGI 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco5g00326 176 Pfam C2 domain 17 101 IPR000008 -
Phco5g00326 176 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 13 102 IPR035892 -
Phco5g00326 176 Gene3D C2 domain 13 174 IPR035892 -
Phco5g00326 176 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 14 174 IPR044562 -
Phco5g00326 176 SMART C2_3c 18 113 IPR000008 -
Phco5g00326 176 CDD C2_ArfGAP 16 159 - -
Phco5g00326 176 ProSiteProfiles C2 domain profile. 1 117 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco5g00326 Phco-Chr5 2760456 2762488 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02644 2 56143466 56145321 Phco5g00326 5 2760456 2762488 ECH
Phco4g01838 4 35880202 35890521 Phco5g00326 5 2760456 2762488 ECH
Phco8g03105 8 45499543 45501875 Phco5g00326 5 2760456 2762488 ECH
Phco5g00326 5 2760456 2762488 Phco5g00326 5 2760456 2762488 ECH
Phco4g03731 4 56762973 56763719 Phco5g00326 5 2760456 2762488 PCT