Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03731 ATGGACGAATTACTCGGCCTTCTCAGAATTCATGTCAAGCGTGGTGTCAACCTCGCCATTCGTGATGTCAGCACAAGCGATCCATACGTCGTCGTTAAGATGGACAAGCAGAAGCTCAAGACCAGTGTGATTAAAAAGGATATTAACCCTGAGTGGAATGAAGATCTTACCTTTTCTGTCACAGATCCCTCTTGTCCATTGATAATGACTGTGTATGATCATGACACTTTCAGCATGGATGACAAAATGGGAGATGCAGAATTTGATATCTCACCATATATAGAAGCCGTAAAGATGGAAGTAGATGATCTTCCCAATGGCACCATAATCACGAGAATGCTACCATGTAGGACAAACTGTCTGGCGGAGGAAAGTTGCGTGGTTTATGAGAATGGTAAAGTTCTACAAAATGTTGTTCTAAGATTACGACATGTGGAATGCGGTGAGCTGGAAATTCAGTTGGAATGGATTAGTCTTCCTGGGTCCAAGTCTTAA 495 0.4242 MDELLGLLRIHVKRGVNLAIRDVSTSDPYVVVKMDKQKLKTSVIKKDINPEWNEDLTFSVTDPSCPLIMTVYDHDTFSMDDKMGDAEFDISPYIEAVKMEVDDLPNGTIITRMLPCRTNCLAEESCVVYENGKVLQNVVLRLRHVECGELEIQLEWISLPGSKS 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03731 164 Pfam C2 domain 6 92 IPR000008 -
Phco4g03731 164 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Phco4g03731 164 CDD C2_ArfGAP 5 148 - -
Phco4g03731 164 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 3 163 IPR044562 -
Phco4g03731 164 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 150 IPR035892 -
Phco4g03731 164 Gene3D C2 domain 3 164 IPR035892 -
Phco4g03731 164 SMART C2_3c 7 102 IPR000008 -
Phco4g03731 164 PRINTS C2 domain signature 46 59 IPR000008 -
Phco4g03731 164 PRINTS C2 domain signature 22 34 IPR000008 -
Phco4g03731 164 PRINTS C2 domain signature 67 75 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g03731 Phco-Chr4 56762973 56763719 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g03731 4 56762973 56763719 Phco5g00326 5 2760456 2762488 PCT