Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g02189 ATGAGATTCTTAGCGGTGTGTTTTGTCTTCTTATTGCTGGTGCTACAAGTAGAAGACACCACATGTTTCACTTTCAGCAGGGAGAAAAAGCTGTCAGAATTCAGGACCAAGCTTGATCGAAAGATTCAAAATTTAGCTACAACTCCTTTGGCATCACCACTTGCTTCACCAGAAACAACTAGGAAAGGGAGAGTGTTGTACGTGAGTGAGTATGGTGCGGATCCAAGTGGGAATGAAGAGAGTGGTGATGCCATTTTGAAAGCAGTGGAAGATGCTTTTGGTATGCAGAAGGGCTATGAGATGGTAGCAGGAGTGAATGAGCTTGGAGGGGTTGTGATTGATTTGGAAGGTGGAAACTACAAAATCAGCAAACCCATTACATTCCCTTCTGGTACTGGCAATGTTGTGGTAAAAGAAGGAACGTTGAGAGCATCTGATGAATTTCCTGGTGATCGACATCTAGTTGAGTTATGGTCATCAAAGTCTGAGCAACATGGCAATGGTGGAATTTACTATGAAGACATAACTTTCAGGGACATTCTCTTTGATTCAAGCTATAGAGGAGGAGGGATGTTCATTGTTGATTCGACTAGAATCCGGATCAACAATTGCTTCTTCCTTCACTTCACCACACAAGGAATTCTGGTCAACAAAGGACACGAGATCTATATCACAAGTTGCTTTCTTGGGCAACACTCAACCGTGGGCGGAGACAAAGGTGAGAAGAACTTCTCAGGGGTGGCCATTGATCTTGCTAGTAATGATAATGCAATCACAGATGTTGTAGTTTTCTCAGCGGCCATTGGTGTTGTTCTAAGGGGTCAAGCTAACATTCTAACTGGGGTGCATTGTTATAACAAGGCAACAGGTTTTGGTGGCATAGGGATATTAGTGAAATTGCCTGGTAATTCTCTGACTAGAATTGACAACTGTTACATGGATTACACTGGAATAGTCATGGAAGATCCTGTTCAAGTTCATGTCACAAATGGGTTATTTCTAGGGGATGCTAATATTGTATTGAAGTCTATAAAAGGTAGGATTTTTGGCCTAAATATAGTGAATAACATGTTCAATGGTGATCCCATAAGGAAGGTTCCTATTGTAAGTCTGGATGGGGAATTCAGTAGCATTGATCAAGTGGTGGTTGATGGCAACCATGCGAATGGCATGAGCTTGAGATCAACAGTTGGGAAGTTAACTGCCAGTGGAAATGGCACAAAGTGGGTGGCTGATTTTTCATCGGTTTTGGTGTTTCCCAAGAGAATCAGTCATTTTCAATATTCATTTTATGCTCAAGATGAACCTAAATTTGTAGCATTTTCTGTGACCAATGTGTCAGATAACGTTGTTGTTGTGGAGAGTGAGAAAGAAGCCAAGGGGTTTGTCTCCTTCACAGTAGAACAATAA 1410 0.4163 MRFLAVCFVFLLLVLQVEDTTCFTFSREKKLSEFRTKLDRKIQNLATTPLASPLASPETTRKGRVLYVSEYGADPSGNEESGDAILKAVEDAFGMQKGYEMVAGVNELGGVVIDLEGGNYKISKPITFPSGTGNVVVKEGTLRASDEFPGDRHLVELWSSKSEQHGNGGIYYEDITFRDILFDSSYRGGGMFIVDSTRIRINNCFFLHFTTQGILVNKGHEIYITSCFLGQHSTVGGDKGEKNFSGVAIDLASNDNAITDVVVFSAAIGVVLRGQANILTGVHCYNKATGFGGIGILVKLPGNSLTRIDNCYMDYTGIVMEDPVQVHVTNGLFLGDANIVLKSIKGRIFGLNIVNNMFNGDPIRKVPIVSLDGEFSSIDQVVVDGNHANGMSLRSTVGKLTASGNGTKWVADFSSVLVFPKRISHFQYSFYAQDEPKFVAFSVTNVSDNVVVVESEKEAKGFVSFTVEQ 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g02189 469 Gene3D - 68 461 IPR012334 -
Phco4g02189 469 PANTHER POLYGALACTURONASE QRT3 10 469 IPR039279 GO:0004650
Phco4g02189 469 FunFam Polygalacturonase QRT3 68 464 - -
Phco4g02189 469 SUPERFAMILY Pectin lyase-like 52 395 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g02189 Phco-Chr4 42569129 42572011 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g02189 4 42569129 42572011 Phco4g02189 4 42569129 42572011 ECH