Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g02184 ATGAGGAACAGAAACAACCATCATCCCAGGTTGTTCCCTAAAAACGTTTCCACGGCCATTTTCCCCGCCATCTTTCCAAGGAAAATTTACACAGCAAAAGAAGAAACCATGCATAACCTTTCCTTTAACATTAAGGGTTTTCACCCTTCTATGACGTCTCCTTTTTCGTACACATTCCCCATCAGTGGTGCTGGTAGTAGTACTACTACTAGCAATCTTACCACTGCCACTTACAGCACTTCTACTCTATGGATGAACAGCAGAATATGGAGCAAGCTCCCTCAAAGGCTTCTCGACCGTGTCATAGCCTTCCTTCCTCCACCAGCTTTCTTTCGTGCACGTTGTGTTTGCAAGAGATGGTATGCCCTTCTCTTCTCCAACACCTTCCTTGAATTATATCTCCAAGTCTCTCCCCACCGCCACTGGTTCATGTTCTTCAAGCACCACAAAACTCGCAAGAGCTACATCTACAAGAACAGCAACAACGGTAGCGGCTGTGGACATGGTGCAGCCTCTTCCTGTGAAGAAGGGTACCTCTTTGATCCCTCTGACATGGCATGGTACCGCATTTCCTTTGCTATAGTCCCTTCTGGCTTCTCTCCAGCCTCATCTTCTGCTGGTTTACTTTGTTGGGTTTCTGATGAGGCTGGTCCCAAGACCATGCTTCTGTGCAACCCTTTGGTTGGTTCTCTCACTCAGTTACCTCCCACGTTGAGACCTAGACTCTTCCCTTCCATTGGCCTAACCATCAGCCCCACCTGCATAGATGTCACTGTCGCGGGGGATGACATGATATCTCCTTATGCAGTGAAGAACTTGACATCTGAGAGCTTTCACATCGATGGAGGAGGGTTTTACTCCTTGTGGGGCACTACCTCTTCTCTGCCTAGGCTTTGCAGCCTTGAATCCGGTCGAATGGTTTACGCTGAAGGGAAGTTTTACTGCATGAATTGTAGCCCTTTCAGTGTGCTGGCTTATGACATCACATCAAACAATTGGTTCAAAATACAAGCCCCAATGAGGAGGTTCCTCAGGTCTCCCAACCTCGTTGAGTGCAAGGGGAAGCTGCTTCTTGTTGCGGCTGTTGAGAAGAGCAAGCTGAACGTGCCAAAGAGTTTGAGGGTGTGGAGTTTGCAGGCTTGTGGGACAATGTGGGTGGAGTCAGAGAGAATGCCGCAGCAGCTTTATATTCAGTTTGCTGAATTGGAAGTTGGAAACGGGTTTGAATGTGTAGGGCATGGGGAGTTTATTGTGATCATGATTCGTGGAACAGACAAAGCGTTGCTGTTTGATATATGCAGGAAGAGGTGGCAGTGGATTCCACCTTGTCCTTACATTGCACATGATGGCTTTGAATTGCATGGTTTTGCATATGAACCTAGACTCGCCACTCCAGTCACTAGCCTCCTTGATCAATTGGCACTTCCCTTCCAGACTTTTAATGCTTAA 1449 0.4748 MRNRNNHHPRLFPKNVSTAIFPAIFPRKIYTAKEETMHNLSFNIKGFHPSMTSPFSYTFPISGAGSSTTTSNLTTATYSTSTLWMNSRIWSKLPQRLLDRVIAFLPPPAFFRARCVCKRWYALLFSNTFLELYLQVSPHRHWFMFFKHHKTRKSYIYKNSNNGSGCGHGAASSCEEGYLFDPSDMAWYRISFAIVPSGFSPASSSAGLLCWVSDEAGPKTMLLCNPLVGSLTQLPPTLRPRLFPSIGLTISPTCIDVTVAGDDMISPYAVKNLTSESFHIDGGGFYSLWGTTSSLPRLCSLESGRMVYAEGKFYCMNCSPFSVLAYDITSNNWFKIQAPMRRFLRSPNLVECKGKLLLVAAVEKSKLNVPKSLRVWSLQACGTMWVESERMPQQLYIQFAELEVGNGFECVGHGEFIVIMIRGTDKALLFDICRKRWQWIPPCPYIAHDGFELHGFAYEPRLATPVTSLLDQLALPFQTFNA 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g02184 482 SUPERFAMILY Galactose oxidase, central domain 114 445 IPR011043 -
Phco4g02184 482 FunFam protein UNUSUAL FLORAL ORGANS 86 130 - -
Phco4g02184 482 Pfam F-box domain 90 124 IPR001810 GO:0005515
Phco4g02184 482 SUPERFAMILY F-box domain 88 162 IPR036047 GO:0005515
Phco4g02184 482 Gene3D - 85 130 - -
Phco4g02184 482 SMART fbox_2 93 133 IPR001810 GO:0005515
Phco4g02184 482 ProSiteProfiles F-box domain profile. 87 136 IPR001810 GO:0005515
Phco4g02184 482 PANTHER BNACNNG10540D PROTEIN 81 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g02184 Phco-Chr4 42540895 42542634 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g02184 4 42540895 42542634 Phco4g02184 4 42540895 42542634 ECH