Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g02154 ATGAAGGTTTATGTACGAAAACTGTTAGCAGTGGACAAAGTCTCATGCAGACCAAGCGAAAGTTGGGCAACCCTGAAACATCAGTTTTTGAGGACTGGTAAGAAGTTCAGACAACACCCTATGCCTAGTTTCATAGTGGAATCAATGATGCAGAACCATCACCAACATATTCTAACAATGGTTTTTCCAAAACCTGCTTCTGAGTCTGACCTCTTTCTTCATTCCAATTTTGCATCTCGCTATGTTAGGGACTCACTTCCCAGGTTCAGCATGCCCGAGGACTCCATGCCTAAGGAAGCTGCCTACCAGAACATACACGATGAGTTGCAACTTGATGCCATTCCAAAGCTTAACTTGGCTTCCTTTGTCACCACTTCCATGGAAGAAGAGTGCAACAAACTCATCATGGAATCCATCAACAAGAACTATGTTGACATGGATGAGTATCCTATCACCACAGACCTTCACAACCGGTGCCTGAACATGATAGCACGTTTGTTCCATGCTGAAATTGGAGAAAATGAGAATGCAGTTGGAGCAGGAACTGTGGGATCATCAGAGGCCATAATGCTAGCAGGGCTTGCATTCAAAAAGAAGTGGCAGAACAAGCGCAAGGCAGAGGGCAAGCCTTATGATAAGCCTAATTTGGTTACTGGTTCCAATGTGCAAGTATGTTGGGAGAAATTTGCCAGGTATTTTGAAGTGGAGTTGAGGGAAGTGGAGGTGAGAGAAGGCTACTACGTGATGGATCCAGCCAAAGCCGTTGAGCTGGTTGATGAGAACACTATTTGTGTGGCTGCAATCTTGGGTTCAACTTACAATGGAGAGTTTGAAGATGTGAAGCTCTTGAATGAGTTGCTGCTACAAAAGAATAAGCAAACTGGATGGGAAACACCTATTCATGTGGATGGTGCTAGTGGTGGTTTCATTGCGCCTTTCCTTTATCCAGAGTTGGAGTGGGATTTCAGACTGGAATTGGTGAAGAGCATAAATGTGAGTGGACACAAGTATGGGCTTGTTTATGCTGGTATTGGTTGGGTTATTTGGAGGAGCAAGGAGGAGTTGCCCCAAGACCTTGTCTTCCATATCAATTACCTTGGAGCTCCCCAACCCACCTTCACCCTCAATTTCTCTAAAGGTTCTAGTCAGATCATTGCTCAATATTATCAGCTAATTCGTCTTGGCCAAGAGGGTTACCGAAGCATAATGGAGAACTGCAGAGAAAATGCAAAGGTGGTGAAGGAAAATTTGGAGAAGAGTGGACGCTTTAACATAGTTTCAAAAGACAATGGAGTTCCTGTGGTGGCATTTTCTCTGAAAGACCGAAGCCAGTATGACGAGTACAAGATATCAGAGATGCTGCGGCGCCACGGTTGGATCGTGCCAGCTTATCCAATGCCACCTGCTGCCCAACACATAAATGTGCTCCGTGTGGTGATAAGGGCTGAGTTTTCACGTACCCTTGCTCAACGCCTTGCGTTTGACATACACAATGTGCTGCATGAGCTTGATAAGGTGCATCAGACCAATAAAACTGAGGAAGTGAACAAGGGCTTGGTTGATAGTGGTGTAAAGAAAACTGCAATGGATGCTCAAAGTGAAATCATTTCTCAAGAATCCAACAAGCGTCAGAAAATCATGGCTGCCTAA 1650 0.4473 MKVYVRKLLAVDKVSCRPSESWATLKHQFLRTGKKFRQHPMPSFIVESMMQNHHQHILTMVFPKPASESDLFLHSNFASRYVRDSLPRFSMPEDSMPKEAAYQNIHDELQLDAIPKLNLASFVTTSMEEECNKLIMESINKNYVDMDEYPITTDLHNRCLNMIARLFHAEIGENENAVGAGTVGSSEAIMLAGLAFKKKWQNKRKAEGKPYDKPNLVTGSNVQVCWEKFARYFEVELREVEVREGYYVMDPAKAVELVDENTICVAAILGSTYNGEFEDVKLLNELLLQKNKQTGWETPIHVDGASGGFIAPFLYPELEWDFRLELVKSINVSGHKYGLVYAGIGWVIWRSKEELPQDLVFHINYLGAPQPTFTLNFSKGSSQIIAQYYQLIRLGQEGYRSIMENCRENAKVVKENLEKSGRFNIVSKDNGVPVVAFSLKDRSQYDEYKISEMLRRHGWIVPAYPMPPAAQHINVLRVVIRAEFSRTLAQRLAFDIHNVLHELDKVHQTNKTEEVNKGLVDSGVKKTAMDAQSEIISQESNKRQKIMAA 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g02154 549 PANTHER GLUTAMATE DECARBOXYLASE 61 542 IPR010107 GO:0004351|GO:0006536|GO:0030170
Phco4g02154 549 Gene3D - 60 124 - -
Phco4g02154 549 FunFam Glutamate decarboxylase 125 419 - -
Phco4g02154 549 NCBIfam glutamate decarboxylase 75 503 IPR010107 GO:0004351|GO:0006536|GO:0030170
Phco4g02154 549 Pfam Pyridoxal-dependent decarboxylase conserved domain 92 440 IPR002129 GO:0016830|GO:0019752|GO:0030170
Phco4g02154 549 SUPERFAMILY PLP-dependent transferases 74 503 IPR015424 -
Phco4g02154 549 FunFam Glutamate decarboxylase 63 124 - -
Phco4g02154 549 FunFam Glutamate decarboxylase 420 507 - -
Phco4g02154 549 Gene3D - 125 419 IPR015421 GO:0003824
Phco4g02154 549 Gene3D - 420 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g02154 Phco-Chr4 42223494 42226874 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g02154 4 42223494 42226874 Phco4g02154 4 42223494 42226874 ECH