Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g02153 ATGTACCTGTTCCTTTTTGTCAAGGCAGAAACAGAAAATTCTAAAGCCAATGAAGGATTCTACCCTCTAAGTTCTCACCTATCTACCATTAATTTCCTAAGTATAAATACCACTACTTGCCTCTTCAACCCTCCTCATCAAACATCCAAGTATTCTCTCTTTGCTGTCTCCCACACCACCAACATCTTCACCATGGTTTTTCCAAAACCTTCTTCTGAGTCTGACCTCTTTCTTCATTCCAACTTCGCCTCTTGTTATGCCGGAGACTCTCTTCCCAGGTTCAGCATGCCCGAGAACTCCATGCCTAAAGATGCAGCTTACCAAAACATACACGATGAGTTGCAGCTTGATGCTATTCCAAAGCTTAACTTGGCTTCCTTTGTCACCACTTCCATGGAGGAAGAGTGCAACAAGCTCATCATGGAATCTATCAACAAGAACTATGTAGACATGGATGAGTATCCTGCCACCACTGACCTTCATAATCGGTGTGTGAACATGATAGCACGTTTGTTCCATGCTGAACTTGGAGAAAATGAGAATGCTGTTGGAGCAGGAACTGTGGGATCATCAGAGGCCATAATGCTGGCAGGGCTTGCATTCAAAAAGAAGTGGCAAAACAAGCGCAAGGCAGAGGGAAAGTCTTATGATAAGCCAAACTTGGTCACTGGTTCCAATGTGCAAGTATGTTGGGAGAAATTTGCAAGGTATTTTGAGGTGGAGTTGAGGGAAGTGGAGGTTAGAGAAGGCTACTACGTGATGGACCCTGCCAAAGCTGTTGAGCTGGTTGACGAGAACACTATTTGTGTGGCTGCCATCTTGGGTTCAACTTACAATGGAGAGTTTGAAGATGTGAAGCTCTTAAACGACTTGCTGCTACAAAAGAATAAGCAAACTGGATGGGAAACACCTATTCATGTGGATGGTGCTAGTGGTGGTTTCATTGCTCCTTTCCTTTATCCAGAGTTGGAGTGGGATTTCAGACTGGAATTGGTGAAGAGCATAAATGTGAGTGGACACAAGTATGGGCTTGTTTATGCCGGTATTGGTTGGGTTATTTGGAGGAACAAGGAGGAGTTGCCCCAAGACCTTATCTTCCATATCAATTACCTTGGAGCTCACCAACCCACCTTCACCCTCAATTTTTCTAAAGGTTCTAGTCAGATCATTGCTCAATATTATCAGCTAATTCGTCTTGGCCAAGAGGGTTACCGAAGCATAATGGAGAACTGCAGAGAAAATGCAAAGGTGGTGAAGGAAAATTTGGAGAAGAGTGGACGCTTTAACATAGTTTCAAAAGACAATGGTGTTCCTGTGGTGGCATTTTCTCTGAAAGACCGAAGCCAGTATGACGAGTACAAGATATCAGAGATGCTGCGGCGCCACGGTTGGATCGTGCCAGCTTATCCAATGCCACCTGCTGCACAACACATAAATGTGCTCCGTGTGGTGATAAGGGCTGAGTTTTCACGCACCCTTGCTCAACGCCTTGTTTTTGACATACACAATGTGCTGCATGAGCTTGAAAAGGTGCATCTTCCGAAAGTGATGAACAACATTACGGAAGATAAGAAGGATTTGGTTGAAAGCGGGGTTAAGAAAACTGCACTGGATGCACATAGGGAAATCATTGGTCAAGAGTCGAACAAGCGTCAGAAAATCATGGCTGCGTAG 1674 0.4444 MYLFLFVKAETENSKANEGFYPLSSHLSTINFLSINTTTCLFNPPHQTSKYSLFAVSHTTNIFTMVFPKPSSESDLFLHSNFASCYAGDSLPRFSMPENSMPKDAAYQNIHDELQLDAIPKLNLASFVTTSMEEECNKLIMESINKNYVDMDEYPATTDLHNRCVNMIARLFHAELGENENAVGAGTVGSSEAIMLAGLAFKKKWQNKRKAEGKSYDKPNLVTGSNVQVCWEKFARYFEVELREVEVREGYYVMDPAKAVELVDENTICVAAILGSTYNGEFEDVKLLNDLLLQKNKQTGWETPIHVDGASGGFIAPFLYPELEWDFRLELVKSINVSGHKYGLVYAGIGWVIWRNKEELPQDLIFHINYLGAHQPTFTLNFSKGSSQIIAQYYQLIRLGQEGYRSIMENCRENAKVVKENLEKSGRFNIVSKDNGVPVVAFSLKDRSQYDEYKISEMLRRHGWIVPAYPMPPAAQHINVLRVVIRAEFSRTLAQRLVFDIHNVLHELEKVHLPKVMNNITEDKKDLVESGVKKTALDAHREIIGQESNKRQKIMAA 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g02153 557 Gene3D - 65 129 - -
Phco4g02153 557 CDD DOPA_deC_like 123 501 - -
Phco4g02153 557 FunFam Glutamate decarboxylase 130 424 - -
Phco4g02153 557 FunFam Glutamate decarboxylase 425 512 - -
Phco4g02153 557 Pfam Pyridoxal-dependent decarboxylase conserved domain 97 445 IPR002129 GO:0016830|GO:0019752|GO:0030170
Phco4g02153 557 Gene3D - 425 511 - -
Phco4g02153 557 FunFam Glutamate decarboxylase 68 129 - -
Phco4g02153 557 NCBIfam glutamate decarboxylase 81 508 IPR010107 GO:0004351|GO:0006536|GO:0030170
Phco4g02153 557 Gene3D - 130 424 IPR015421 GO:0003824
Phco4g02153 557 PANTHER GLUTAMATE DECARBOXYLASE 69 550 IPR010107 GO:0004351|GO:0006536|GO:0030170
Phco4g02153 557 SUPERFAMILY PLP-dependent transferases 81 510 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g02153 Phco-Chr4 42215465 42219020 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g02153 4 42215465 42219020 Phco4g02153 4 42215465 42219020 ECH