Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g02146 ATGGAGCAAGAACAAGAGCAGCAACCCCTTTCACTTTCCCTTTCCTTTTCCCTTTCTGTTGTCTCTGCTGCTTCTGCTCCTTCCTCTTCAGGTGAACACTCCAGTCCAGCAGATGCAGTGATCTTCTTTGGTCTCAGTTTGGCTCTGGGGATTGCTTGTAGGCACCTCTTGCGTGGGACTAGAGTTCCTTACACCGTTGCCTTGCTCATAATTGGCATTGCACTTGGATCTATAGAATATGGTACTCATCATCGGCTGGGAAAGATTGGAGATGGAATTCGTCTCTGGTCAGAGATTGATCCAGACCTTTTGTTAGCTGTTTTTCTTCCTGCTCTCCTTTTTGAGAGCTCATTCTTAATGGAAGTTCACCAAATTAAGAGGTGTCTTGCACAAATGATCTTACTAGCTGGTCCTGGTGTTGCGATTTCAACTGTTTGTCTTGGAGTTGTTATGAAGCTTACTTTTCCATACAACTGGGGCTGGAAAACATCACTGTTGCTTGGGGGACTTCTGAGTGCAACTGATCCTGTTGCTGTTGTGGCGTTGTTGAAAGATCTTGGTGCCAGCAAAAAACTAAGCACAATAATTGAAGGGGAATCCTTGATGAATGATGGGACGGCTATTGTGGTTTATACTCTTTTCTATCGGATGGTTCTTGGAGAGACCTTCAATTGGGTTGCTATAATCAAATTTCTAGCACAAGTTTCACTTGGAGCTGTAGGAATGGGTCTTGCTTTTGGGATTGTATCTGTTTTGTGGCTAGGGTTTATTTTTAATGATACAGTGATTGAGATTGCTCTAACATTTGCTGTTAGCTACATTGCTTATTTCACTGCCCAGGAGGGTTCAGGTGTCTCAGGTGTTTTGACGGTGATGTCTTTGGGAATGTTTTATTCTGCATTTGCAAGAACAGCTTTTAAGGGTGAAAGTCAACAAAGCTTGCATCACTTTTGGGAAATGATTGCTTATATAGCTAATACCTTAATTTTCATTTTGAGTGGAGTTGTAATAGCTGAAGGAATACTTAGTGACAACACTGTTTTCTATCATGGAGCATCATGGACCCACCTCTTGCTTCTCTATGCGTATGTTCAAGTTTCTCGATGCATTGTAGTTGGAGTATTATTTCCCTTTCTAAGATATTTTGGATATGGTTTGGATTGGAAAGAAGCTATTATTCTCGTTTGGTCAGGATTGCGAGGGGCAGTTGCCTTGGCACTTTCATTATCAGTTAAGCGTTCGAGTGGCAAATCAGTTGAGTTGACTCCAGAGACAGGAACACTGTTTGTTTTCTTCACTGGTGGAACTGTGTTTTTAACACTTGTAGTAAATGGGTCTACCACACAACTCATTTTACGCTACCTTGGCATGGATAATTTATCAGCAGCTAAGAGACGTATCCTTGACTTTACAAAGCATGAAATGTTAGACAAGGCATTAGAGGCTTTCAGTGAACAAGGAGATGATGAGGAACTTGGGCCTGCTGACTGGCCATCAGTGAAGAGATACATCTCTTGCTTAAATGACATTGAAGGTGAACGTGTTCACCCTCATGGTGCACCTGAAAAGGATAGTCACCTAGATCCTATGAACTTGAAAGATATACGAGTACGCCTTCTGAATGGTGTACAGGCTGCTTACTGGGAGATGCTTGATGAAGGAAGAATTTCTCAAACAACAGCTAATATCCTAATGTTATCCGTTGAGGAAGCAATAGATTTGGCTTCTTCTGAGCCTCTATGTGACTGGAAGGGTTTAAAATCCAGTGTCCACTTCCCGAGTTACTACAAGTTTCTACAGTCCAGTATGTTCCCACCGAAGTTAGTGACATACTTCACTGTGCAAAGGTTGGAATCTGCATGTTATATTTGTGCTGCGTTTCTTCGTGCTCACAGAATTGCTCGGCAACAATTACATGACTTCATAGGTGACAGTGATGTTGCTTCTGCTGTCATCAATGAAAGTGTTGTAGAAGGAGAAGAAGCACGGAAGTTCCTAGAAGATGTTAATGTAACATACCCTCAGGTTCTGCGTGTTGTAAAAACAAGGCAAGTTACATATGCAGTGCTACATAATTTAATGGAATATGTTCAAAACCTTGAGAAGACTGGGATATTGGAAGAGAAAGAGATGCTACATCTCCATGATGCTGTCCAGACTGATTTGAAGAAATTACTTAGAAATCCTCCTTTGGTTAAGCTTCCTAAAATAAGTAGCATACATCCTATGTTGGGTGCTCTCCCATCTTCAGTTCGTGAATCACTTGCAAACTGTACCAAGGAAATGATGAAATTCCGTGGTCTGACACTTTACAAGGAAGGTGCAAAGTCAAATGGTATTTGGTTAATTTCTAATGGAGTGGTGAAGTGGGAAAGCAAGATGACAACAACCAAACACTCTTTTTATCCTACTTTTACACATGGGAGTACATTGGGTCTTTATGAAGTGCTGACCGGAAGACCATATATGTGTGATGTCATCACAGATTCTGTGGTATTCTGCATTTTTCTTGAAGCTGATAAGATAATATCATGTCTTAAATCAGATCCTTCAATAGAAAAATTCCTGTGGGAGGAAAGTGCTATTTTCCTTTCCAAACTATTGCTTCCTCAGATATTTGAGAAACTGGCTATGCAAGATTTAAGAGCTCTTATTGCAGATCCAGAGAGATCTCGGATGACCATATTTATTAGAGGGGAAACAATAGAAATCCCTCATCATTCAGTTGCCCTCTTACTAGAAGGATATCTCAAAACTCAAGGTCGTCAAGAACTGGTAACAGCACCAGCAGCCCTGCTTCCTTCACCGGGGAATCTAAGCTTCCAAAATTTGGTAGGATCAGGTTCGAAGGGAGATAGTTTTACTCATGAAGGATCTTTTTACCTGGTTGAAACTACAGCAAGGGTTATTCTTTTTGACATTCCAACACCTGTAGCCGATGCTTCTCTTGTTAGACAGTCAAATTCAGTGTTATTGCATGTCGGGGATAACCCTCATAGATCTTTCCGTCGAAAACATAGTGGTCTTATGAGTTGGCCCGAACATTTCTACAAACACAACCATGAGCAGATATCTGAAGGGATTCAACGACAAACCAATAGTTTGTCTGCAAGGGCAATGCATCTCAGCATTTATGGGAGCATGGTAAGGATCCCTCAACGGAGTAGAAGTTTGTCAAGCCATCATGGTAGAGCACTTCGTAGCCTATCCTATCCAACCATTGGGTCGCACCGTCCACTTGTCTCAGTCAAATCAGAAGGAGCTGTAACTGCTAAGAAGGTCCATGAGGTCACAAGACAAGTTACAAATCCACCTTCACAAAGCACACAACAAAGACAACATCATCATGGTCATGGAGATAATTCAAGTGATGAAGAAGAAGATATTATTGTGAGGATTGATTCACCCAGCACTCTATCTTTTCGCTAG 3429 0.4147 MEQEQEQQPLSLSLSFSLSVVSAASAPSSSGEHSSPADAVIFFGLSLALGIACRHLLRGTRVPYTVALLIIGIALGSIEYGTHHRLGKIGDGIRLWSEIDPDLLLAVFLPALLFESSFLMEVHQIKRCLAQMILLAGPGVAISTVCLGVVMKLTFPYNWGWKTSLLLGGLLSATDPVAVVALLKDLGASKKLSTIIEGESLMNDGTAIVVYTLFYRMVLGETFNWVAIIKFLAQVSLGAVGMGLAFGIVSVLWLGFIFNDTVIEIALTFAVSYIAYFTAQEGSGVSGVLTVMSLGMFYSAFARTAFKGESQQSLHHFWEMIAYIANTLIFILSGVVIAEGILSDNTVFYHGASWTHLLLLYAYVQVSRCIVVGVLFPFLRYFGYGLDWKEAIILVWSGLRGAVALALSLSVKRSSGKSVELTPETGTLFVFFTGGTVFLTLVVNGSTTQLILRYLGMDNLSAAKRRILDFTKHEMLDKALEAFSEQGDDEELGPADWPSVKRYISCLNDIEGERVHPHGAPEKDSHLDPMNLKDIRVRLLNGVQAAYWEMLDEGRISQTTANILMLSVEEAIDLASSEPLCDWKGLKSSVHFPSYYKFLQSSMFPPKLVTYFTVQRLESACYICAAFLRAHRIARQQLHDFIGDSDVASAVINESVVEGEEARKFLEDVNVTYPQVLRVVKTRQVTYAVLHNLMEYVQNLEKTGILEEKEMLHLHDAVQTDLKKLLRNPPLVKLPKISSIHPMLGALPSSVRESLANCTKEMMKFRGLTLYKEGAKSNGIWLISNGVVKWESKMTTTKHSFYPTFTHGSTLGLYEVLTGRPYMCDVITDSVVFCIFLEADKIISCLKSDPSIEKFLWEESAIFLSKLLLPQIFEKLAMQDLRALIADPERSRMTIFIRGETIEIPHHSVALLLEGYLKTQGRQELVTAPAALLPSPGNLSFQNLVGSGSKGDSFTHEGSFYLVETTARVILFDIPTPVADASLVRQSNSVLLHVGDNPHRSFRRKHSGLMSWPEHFYKHNHEQISEGIQRQTNSLSARAMHLSIYGSMVRIPQRSRSLSSHHGRALRSLSYPTIGSHRPLVSVKSEGAVTAKKVHEVTRQVTNPPSQSTQQRQHHHGHGDNSSDEEEDIIVRIDSPSTLSFR 1142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g02146 1142 SUPERFAMILY cAMP-binding domain-like 741 861 IPR018490 -
Phco4g02146 1142 MobiDBLite consensus disorder prediction 1113 1132 - -
Phco4g02146 1142 Pfam Sodium/hydrogen exchanger family 41 453 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Phco4g02146 1142 ProSiteProfiles cAMP/cGMP binding motif profile. 743 859 IPR000595 -
Phco4g02146 1142 CDD CAP_ED 743 857 IPR000595 -
Phco4g02146 1142 Gene3D Jelly Rolls 721 869 IPR014710 -
Phco4g02146 1142 MobiDBLite consensus disorder prediction 1096 1112 - -
Phco4g02146 1142 Gene3D - 161 212 - -
Phco4g02146 1142 PANTHER SODIUM/HYDROGEN EXCHANGER 24 807 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Phco4g02146 1142 MobiDBLite consensus disorder prediction 1087 1142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g02146 Phco-Chr4 42030803 42068197 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g02146 4 42030803 42068197 Phco4g02146 4 42030803 42068197 ECH