Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g02140 ATGTTGTCCACATCGCCTTTCTCCCAAATTTTAAAAACCTCTTTCTATTTCTGTCTCTCTCATCTTTCTCTCTCCGGAAGGGCAAACCCTAAAGACCGTTTGCACCCACCAATTGTCATGGATGATGATGTGTTGAACATGCCCAATTGGGGTTATTATGAACCCTTTAGAGGGGGACATCTTGGTCTGCAGCTCATGCCTGGTATGACTGATCGAGACACAAAGCCATATTTGCCTGCTCGTGATCCTGCTCTGTTAATGGGTGCTAATGGAACTTTTCACCCTCGAGATTGCGTTGTTTCCGAAGCACCAATGCAGTTGAACTATGTCAGAGATAATTGGACAAGCCAAAGGGATAGGTATTTCAATATGCAGCAGCCTACAAATCCTAATTATGCTGTTATTCCAGAAACATCAGTAGCTCCCAACTTGCAAATTATACAACCACCCGATACATCGAGAGATGAGAAAGTGGATAGAATTGAAGAGTTAGTTGTCAAAAAGGAAGGTGGTCAGTCGAAGAAGAGGCAGACTAAGGGTGCTCTGACGACTCCAAAAGCTAAGAAACCTAGGAAGCCGAAGGATAATAGCAATGTTCCAGTTCAACGTGTGAAGCCCCCGAAGAAGACTATGGAGCTTGTAATTAATGGAATTGATATGGACATTTCTGGTCTACCCATTCCAGTTTGTTCGTGTACCGGGAGTCCTCAGCAATGTTATCGTTGGGGTTGTGGAGGTTGGCAATCGGCCTGTTGCACCACAAATGTGTCGATATATCCTTTGCCAATGAGCATGAAAAGGCGTGGTGCTAGGATAGCTGGGAGGAAAATGAGCCAAGGTGCTTTTAAAAAGGTTTTAGAGAAACTTGCGGCTGAAGGTTATAATTTTGCTAACCCTATTGATCTGAAGACTCATTGGGCTAGACATGGCACCAACAAGTTTGTTACTATCAGGTAG 957 0.4399 MLSTSPFSQILKTSFYFCLSHLSLSGRANPKDRLHPPIVMDDDVLNMPNWGYYEPFRGGHLGLQLMPGMTDRDTKPYLPARDPALLMGANGTFHPRDCVVSEAPMQLNYVRDNWTSQRDRYFNMQQPTNPNYAVIPETSVAPNLQIIQPPDTSRDEKVDRIEELVVKKEGGQSKKRQTKGALTTPKAKKPRKPKDNSNVPVQRVKPPKKTMELVINGIDMDISGLPIPVCSCTGSPQQCYRWGCGGWQSACCTTNVSIYPLPMSMKRRGARIAGRKMSQGAFKKVLEKLAAEGYNFANPIDLKTHWARHGTNKFVTIR 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g02140 318 MobiDBLite consensus disorder prediction 166 207 - -
Phco4g02140 318 SMART GAGA_bind_2 40 318 IPR010409 -
Phco4g02140 318 Pfam GAGA binding protein-like family 40 318 IPR010409 -
Phco4g02140 318 PANTHER - 40 318 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g02140 Phco-Chr4 41912419 41914261 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Phco4g02140 GAGA_bind 1.4e-103 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g02140 4 41912419 41914261 Phco4g02140 4 41912419 41914261 ECH