Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01945 ATGTTGCGTTGCTGTCCAAGTGGCCATATTCGGACAAGAAATCAGCGTGCTAAATCAAAACGTGGACAAAACTTACTCAAAAAATCTGAATGTGTTTGGCAGAAAACCAGAAATATCACAGGACGCTTAAGCACTGATTTAAAAAACCTTGCTGCAATGGCTGCTCTACCCTTCTCAACGACCTGCAGCCATTCCAACTCACCTTTACATCACAATTCAAGATCAAGCTTCATAGGTTTCAGTCAAAGAAACAATCTTTGGCAGTTGCTTGTCATCACTAAGTCAATTTCCAGAAGGGTAATAAGAAAGCTCTCTGTGAAGAATGTTGCCAGCGACGCGAAGCAGGAGCTGAAAGATCCACTCACCAAACGAGATACTTTTCATGATTTTGTTCCAGATTCTGCATCTATTGCTTCAAGCATAAAATTTCATGCTGAGTTCACCACCCATTTTTCTCCAGAGAAGTTTGAGCTCAATAAGGCTTTCTTTGCAACTGCAGAGAGTGTTCGTGATTCCCTCATCATAAATTGGAATGCAACAAATGACTACTATGAAAGGAAGAATGTCAAGCTAGCGTACTATATGTCTATGGAGTATCTACAGGGTAGGGCATTGCTTAATGCAATTGGGAATTTACAGCTCGTGGGTCCTTACGCCGAGGCACTCAGAAAGTTGGGTCACAATTTAGAGGATGTGGCTAATAAGGAGCCAGATGCTGCCCTTGGGAATGGGGGATTAGGTCGGCTTGCTTCTTGCTTTCTTGATTCCTTGGCCACTTTGAATTACCCTGCATGGGGATATGGACTTAGGTACAAGTATGGTTTATTCAAACAGCATATAACAAGGGATGGACAGGTCGAAGTTGCTGAAAACTGGCTTGAGATGGGAAATCCCTGGGAAATTCTCAGAAATGATGTCTCTTATCCTGTTAAATTCTATGGAGAAGTTATTCCAGGGCCAAATGGAAGTAAACAGTGGGTTGGAGGAGAAAATATATTGGCTGTTGCTTATGATGTTCCTATTCCTGGATACGAAACTAGAACAACTATAAACTTGCGATTGTGGTCCACAAAAGTTTCACAGGAAGAATTTGATTTGCTAGCTTTTAATTCTGGAGATCATGCTAAAGCATATGCTGTTTTGAAGAATGCAGAGAAGATCTGCTACGTTCTGTACCCTGGTGATGAATCAATAGAAGGAAAAACTCTGAGACTGAAGCAACAATACACACTATGCTCTGCCTCTCTCCAGGATATCATAGCACGCTTTGAAAAGAGGTCGGGAAAGAGTGTAAATTGGGACACTCTCCCAGATAAAGTGGTGGTGCAAATGAATGATACTCACCCAACTCTCTGCATTCCTGAGCTAATTAGGATATTGATGGATGTCAAGGGTTTAAGTTGGAAGAAAGCCTGGAATATTACTAAGAGAACTGTTGCTTACACAAATCACACAGTTCTGCCGGAAGCACTAGAGAAGTGGAGTTTGACACTTCTGCAGGATTTGCTTCCTCGACATGTGGAAATAATAAGAATGATAGATGAGGAGTTGATACATGAAATCATTTCTGAGTATGGGATAGATGATCTAGACTTGCTGCAACGAAGACTTAAAAAAATGAGAATACTAGAAAATATCGAGTTGCCTTGCTCAGTGATGGAACTACTAAGTACAGAAGAGACTTCAACTGTTGATCCTGTGAAGGAAATTCATGTTGATGATAATGATGTAAAGGCCACTGAAAAAGAAGAAGAAAGAGATGATGATGATGAAGTTGGAGAAGAGGAACAAGAAGAAGATAGTGACAACCCATCAATTGAAGAGGATACAGACAATAAAATTGAAATGAGGTTCAAAGTTGATCCAAAACAACCAATGATGGTTCGCATGGCTAATCTATGCGTTGCTGGTGGGTTTTCTGTAAATGGTGTAGCTGCAATACATAGTGAGATTGTAAAAGAGGAAGTTTTTAATGAATTTTACAAGTTGTGGCCTGAGAAATTCCAGAATAAAACAAATGGGGTGACTCCTAGAAGATGGATCCGTTTCTGTAATCCGAATCTTAGTAAAATCATAACCAAGTGGATTGGAACAGAAGACTGGGTAACGGATCTTGAAAAATTGGCCATACTTCGCAAGTTTGCAGATAACGAGGATCTACAGCTAGAGTGGATAGAAGCAAAAAGAATAAACAAGATTAAGGTTGCATCATTTATCAAAGATAAAACGGGTTATGTTGTCAATCCAAGTGCAATGTTTGATGTACAGGTGAAGCGCATTCACGAATACAAACGACAGTTACTGAATATCATGGGAATTGTTTATCGCTACAAAAAGATGAAAGAAATGAGTGCTGAGGAAAGAAAAGAAATGTTTGTTCCTCGAGTTTGTATTTTTGGGGGTAAAGCATTTGCAACATACGTTCAAGCCAAAAGGATAGTGAAATTCATCACAGATGTAGGAGCTACAATCAACCGTGATCCGGAGATTGGAGATCTTTTGAAGGTTGTATTTGTTCCTGATTACAATGTTAGTGTTGCTGAAATGCTAATTCCTGGAAGTGAGTTGTCCCAGCACATCAGCACGGCTGGGATGGAGGCCAGTGGAACAAGCAACATGAAATTTGCAATGAATGGATGCATAATTATAGGAACTCTTGATGGAGCTAATGTTGAAATAAGAGAAGAGGTAGGAGAAGATAACTTCTTTCTTTTTGGTGCACGAGCTGAAGAAATTGCTGGGCTACGGAAAGAAAGAGCTGAGGGAAAGTTCGTACCAGATCCAAGGTTTGAAGAAGTAAAGGCATATGTAAGAAGTGGTGTCTTTGGCCCCTACAATTACGAAGAATTGATGGGGTCCTTGGAAGGGAATGAAGGCTATGGTCGTGCTGATTATTTCCTTGTTGGCAAGGACTTCCCTAGCTACTTGGAGTGCCAAGAAGAAGTTGACAAGGCATATCGTGATCAAAAAAGATGGACAAAAATGTCAATCTTGAACACAGCTGGTTCATACAAATTCAGCAGTGACCGGACCATTCATGAATATGCAAGAGATATATGGAGAATTGAACCCTTTGAATTGGCTTGA 3087 0.403 MLRCCPSGHIRTRNQRAKSKRGQNLLKKSECVWQKTRNITGRLSTDLKNLAAMAALPFSTTCSHSNSPLHHNSRSSFIGFSQRNNLWQLLVITKSISRRVIRKLSVKNVASDAKQELKDPLTKRDTFHDFVPDSASIASSIKFHAEFTTHFSPEKFELNKAFFATAESVRDSLIINWNATNDYYERKNVKLAYYMSMEYLQGRALLNAIGNLQLVGPYAEALRKLGHNLEDVANKEPDAALGNGGLGRLASCFLDSLATLNYPAWGYGLRYKYGLFKQHITRDGQVEVAENWLEMGNPWEILRNDVSYPVKFYGEVIPGPNGSKQWVGGENILAVAYDVPIPGYETRTTINLRLWSTKVSQEEFDLLAFNSGDHAKAYAVLKNAEKICYVLYPGDESIEGKTLRLKQQYTLCSASLQDIIARFEKRSGKSVNWDTLPDKVVVQMNDTHPTLCIPELIRILMDVKGLSWKKAWNITKRTVAYTNHTVLPEALEKWSLTLLQDLLPRHVEIIRMIDEELIHEIISEYGIDDLDLLQRRLKKMRILENIELPCSVMELLSTEETSTVDPVKEIHVDDNDVKATEKEEERDDDDEVGEEEQEEDSDNPSIEEDTDNKIEMRFKVDPKQPMMVRMANLCVAGGFSVNGVAAIHSEIVKEEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPNLSKIITKWIGTEDWVTDLEKLAILRKFADNEDLQLEWIEAKRINKIKVASFIKDKTGYVVNPSAMFDVQVKRIHEYKRQLLNIMGIVYRYKKMKEMSAEERKEMFVPRVCIFGGKAFATYVQAKRIVKFITDVGATINRDPEIGDLLKVVFVPDYNVSVAEMLIPGSELSQHISTAGMEASGTSNMKFAMNGCIIIGTLDGANVEIREEVGEDNFFLFGARAEEIAGLRKERAEGKFVPDPRFEEVKAYVRSGVFGPYNYEELMGSLEGNEGYGRADYFLVGKDFPSYLECQEEVDKAYRDQKRWTKMSILNTAGSYKFSSDRTIHEYARDIWRIEPFELA 1028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01945 1028 Gene3D Glycogen Phosphorylase B; 610 1023 - -
Phco4g01945 1028 MobiDBLite consensus disorder prediction 583 606 - -
Phco4g01945 1028 Pfam Carbohydrate phosphorylase 612 1022 IPR000811 GO:0005975|GO:0008184
Phco4g01945 1028 Pfam Carbohydrate phosphorylase 222 572 IPR000811 GO:0005975|GO:0008184
Phco4g01945 1028 CDD GT35_Glycogen_Phosphorylase 140 1022 - -
Phco4g01945 1028 PIRSF Glucan_phosphorylase_GlgP 132 559 IPR000811 GO:0005975|GO:0008184
Phco4g01945 1028 PIRSF Glucan_phosphorylase_GlgP 567 1028 IPR000811 GO:0005975|GO:0008184
Phco4g01945 1028 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 128 532 - -
Phco4g01945 1028 MobiDBLite consensus disorder prediction 566 613 - -
Phco4g01945 1028 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 621 1026 - -
Phco4g01945 1028 NCBIfam glycogen/starch/alpha-glucan family phosphorylase 612 1022 IPR011833 GO:0004645|GO:0005975|GO:0030170
Phco4g01945 1028 Gene3D Glycogen Phosphorylase B; 132 584 - -
Phco4g01945 1028 MobiDBLite consensus disorder prediction 566 582 - -
Phco4g01945 1028 FunFam Alpha-1,4 glucan phosphorylase 131 559 - -
Phco4g01945 1028 ProSitePatterns Phosphorylase pyridoxal-phosphate attachment site. 866 878 IPR035090 -
Phco4g01945 1028 PANTHER GLYCOGEN PHOSPHORYLASE 106 1026 IPR000811 GO:0005975|GO:0008184
Phco4g01945 1028 Gene3D Glycogen Phosphorylase B; 675 1007 - -
Phco4g01945 1028 FunFam Alpha-1,4 glucan phosphorylase 675 1007 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01945 Phco-Chr4 38554744 38563650 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g01945 4 38554744 38563650 Phco4g01945 4 38554744 38563650 ECH