Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01939 ATGCCTGTGGCTACCTCTGCCACACCGCGGGGTGGGTTGCCTACTGACAGTGGGGACTCTGTTGTCGCATTAGATCAAGTTCCGCGATGGAATGATGCTGATCAGTCAACTTCATTTTCTAGTTCACATTTTCCTGATCCTCTAGCGTTGCCCTTGGGAGCAGACAGCGGTGATGGCAGTGAGTCGGTGTCAAAATTTCCTGTTGACCGTGAAGTCAATTCAAAGATATATTTGTGGAGGGGGAATCCCTGGAATCTTGAAGTGGATGCGGTGGTGAATTCAACAAATGAGAATATGGATGAAGCACACAGCAGCCCTGGATTGCATGATGCAGCTGGACCTATTCTTGCAGAAGAATGTGCGACTTTGGGTGGATGCCGAACAGGGATGGCTAAAGTTACCAAGGCATATGACCTTCCTGCCAGGAAAATTATCCACACTGTTGGCCCAAAGTATGCTATTAAGTACCATAATGCTGCGGAGAATGCTTTAAGTCATTGCTATCGTTCTTGCTTGGAGCTTTTGGTTGAAAATGGACTTCAAAGCATTGCTATGGGTTGTATTTATACGGAGGCAAAGAACTATCCCCGAGAACCAGCTGCACATGTAGCTATAAGAACTGTGCGACGATTTCTTGTGAAGCAGAAAAACAATGTAACAGCTGTTGTCTTTTGCACCGTGAGCACAACTGATACTGAAATATATAAAAGGTTGCTTCCACTGTACTTTCCTCGTGATAAACATGAGGAGCAGGTTGCTTTAACTAAACTTCCTGCTGATGTTGGGGATGAAAATGGTGAGACAATCATAGCTGAGCGTAAAATCAGAATAAAGCCTTTGCCCAAAAGGAGTGTTTCTAGACCACCTGAATTTGCAATTGATCTTCCTGTTAGTGACGTTGGCTTGGTTAGCCGGAATTCATCATATTTAGATTCATTTCTGGATCCTGCCTTCATGTCCATGATTAAAGACCCTGATCTAAGGCGTATGGAGCAGTGGGAAAAAACTGCTGAAGCACAAAAAGGCTGGAATTGTGCTAAATTGCTAGGATATGGCAACCTTGGTGGACCTACTTTGTCTGCCGCTGAAGAATATTCTCTACACTCTAGATACTTGTCTAAAGCAAATTCTTTAAATCTTTCTGAAATTGCAGAAATGAAAATTGTCTATCGTGGAGGGGTAGACAGTGAGGGCCATCCTGTCATGGTTGTTGTAGGGGCCCACTTCTTACTCAGGTGTCTTGATCTGGAGCGGTTTGTGCTCCATGTGGTAAAGGAGTTTGAGCCTTTAATACAGAAGCCTTTTTCCGTTGTGTACTTCCACTCTGCTGCATCTTTGCAGATACAGCCAGACCTGGGTTGGATGAGAAGATTGCAACAAATACTTGGTCGGAAGCACCAGCGCAACCTGCATGCAATATATGTCCTTCACCCAACTTTCGGACTAAAAGCAGCTGTATTTGGGCTCGAGTTGTTTGTGGACAATGTGGTTTGGAAGAAAGTGGTATATGTTGATCGACTTCTGCAGCTGTTCAGATATGTACCTCGTGAACAGTTGACCATCCCAGATTTTGTGTTCCAGCATGATTTGGAGGTAAATGGAGGGACGGGTCTCATTGTGGATCCCAGAACAAAGTATGTGTATAATAGACCGTGA 1656 0.445 MPVATSATPRGGLPTDSGDSVVALDQVPRWNDADQSTSFSSSHFPDPLALPLGADSGDGSESVSKFPVDREVNSKIYLWRGNPWNLEVDAVVNSTNENMDEAHSSPGLHDAAGPILAEECATLGGCRTGMAKVTKAYDLPARKIIHTVGPKYAIKYHNAAENALSHCYRSCLELLVENGLQSIAMGCIYTEAKNYPREPAAHVAIRTVRRFLVKQKNNVTAVVFCTVSTTDTEIYKRLLPLYFPRDKHEEQVALTKLPADVGDENGETIIAERKIRIKPLPKRSVSRPPEFAIDLPVSDVGLVSRNSSYLDSFLDPAFMSMIKDPDLRRMEQWEKTAEAQKGWNCAKLLGYGNLGGPTLSAAEEYSLHSRYLSKANSLNLSEIAEMKIVYRGGVDSEGHPVMVVVGAHFLLRCLDLERFVLHVVKEFEPLIQKPFSVVYFHSAASLQIQPDLGWMRRLQQILGRKHQRNLHAIYVLHPTFGLKAAVFGLELFVDNVVWKKVVYVDRLLQLFRYVPREQLTIPDFVFQHDLEVNGGTGLIVDPRTKYVYNRP 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01939 551 ProSiteProfiles Macro domain profile. 63 243 IPR002589 -
Phco4g01939 551 SMART YBR022w_8 75 204 IPR002589 -
Phco4g01939 551 Pfam Divergent CRAL/TRIO domain 398 529 IPR001251 -
Phco4g01939 551 MobiDBLite consensus disorder prediction 30 44 - -
Phco4g01939 551 SUPERFAMILY Macro domain-like 62 272 IPR043472 -
Phco4g01939 551 Gene3D - 381 532 IPR036865 -
Phco4g01939 551 CDD Macro_GDAP2-like 74 242 IPR035793 -
Phco4g01939 551 PANTHER GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED 15 288 - -
Phco4g01939 551 Gene3D Leucine Aminopeptidase, subunit E, domain 1 14 248 IPR043472 -
Phco4g01939 551 MobiDBLite consensus disorder prediction 1 45 - -
Phco4g01939 551 Pfam Macro domain 92 204 IPR002589 -
Phco4g01939 551 SMART sec14_4 382 528 IPR001251 -
Phco4g01939 551 SUPERFAMILY CRAL/TRIO domain 380 519 IPR036865 -
Phco4g01939 551 CDD SEC14 386 522 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01939 Phco-Chr4 38497962 38507975 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g01939 4 38497962 38507975 Phco4g01939 4 38497962 38507975 ECH