Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01921 ATGTCCGCGGAGAAGGAGAGAGAGACCCAGGTTTACATCGCCAAGCTTTCTGAGCAAGCTGAGAGATATGAAGAAATGGTTGAATGCATGAAGGCAATTGCAAAACTTGATCTAGAACTGACCGTGGAAGAGAGGAACCTGCTCTCTGTGGGGTATAAAAATGTGATTGGTGCACGAAGAGCTTCTTGGCGCATTATGTCTTCTATTGAACAGAAGGAAGAGTCTAAAGGAAATGAGAACAATGCAAAAATGATCAAGAATTATCGTCAAAAGGTGGAAGAGGAACTCTCCAAAATTTGCAGCGATATTCTGTCAATTATTGACAAGCATCTCATTCCTTCTTCCACCTCAGGAGAAGCCACAGTTTTCTACTATAAGATGAAAGGTGACTATTATCGATATCTAGCTGAGTTCAAGACCGACCAAGAAAGAAAGGAGGCAGCTGAGCAATCACTTAAGGGATATGAGGCTGCTTTAGCAACTGCAAACACTGATCTCCCATCAACACATCCAATCCGTCTTGGACTTGCACTCAACTTCTCAGTCTTCTATTATGAGATAATGAACTCTCCTGAAAGGGCCTGCCATTTGGCTAAGCAAGCTTTTGATGAAGCAATTGCTGAGTTAGACACCTTGAGTGAAGAGTCATACAAGGACAGCACTTTGATTATGCAGCTGTTGAGAGACAATCTCACTCTCTGGACCTCTGATTTACCCGAGGATGGAGGTGATGAAATCAAACCAGAAGAAGTCAAACCTGCTGCGCCTGAGGTTTGA 777 0.4324 MSAEKERETQVYIAKLSEQAERYEEMVECMKAIAKLDLELTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNENNAKMIKNYRQKVEEELSKICSDILSIIDKHLIPSSTSGEATVFYYKMKGDYYRYLAEFKTDQERKEAAEQSLKGYEAALATANTDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGDEIKPEEVKPAAPEV 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01921 258 SUPERFAMILY 14-3-3 protein 6 237 IPR036815 -
Phco4g01921 258 SMART 1433_4 7 248 IPR023410 -
Phco4g01921 258 Coils Coil 145 165 - -
Phco4g01921 258 Pfam 14-3-3 protein 14 235 IPR023410 -
Phco4g01921 258 Coils Coil 13 33 - -
Phco4g01921 258 MobiDBLite consensus disorder prediction 240 258 - -
Phco4g01921 258 MobiDBLite consensus disorder prediction 237 258 - -
Phco4g01921 258 Coils Coil 195 215 - -
Phco4g01921 258 Gene3D - 1 246 IPR036815 -
Phco4g01921 258 PIRSF 14-3-3 1 247 IPR000308 -
Phco4g01921 258 ProSitePatterns 14-3-3 proteins signature 1. 45 55 IPR023409 -
Phco4g01921 258 PANTHER 14-3-3 PROTEIN 7 237 IPR000308 -
Phco4g01921 258 FunFam 14-3-3 protein epsilon 1 248 - -
Phco4g01921 258 ProSitePatterns 14-3-3 proteins signature 2. 217 236 IPR023409 -
Phco4g01921 258 PRINTS 14-3-3 protein zeta signature 154 180 IPR000308 -
Phco4g01921 258 PRINTS 14-3-3 protein zeta signature 208 237 IPR000308 -
Phco4g01921 258 PRINTS 14-3-3 protein zeta signature 39 68 IPR000308 -
Phco4g01921 258 PRINTS 14-3-3 protein zeta signature 88 112 IPR000308 -
Phco4g01921 258 PRINTS 14-3-3 protein zeta signature 181 207 IPR000308 -
Phco4g01921 258 PRINTS 14-3-3 protein zeta signature 119 141 IPR000308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01921 Phco-Chr4 38145830 38149016 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g01921 4 38145830 38149016 Phco4g01921 4 38145830 38149016 ECH
Phco4g01921 4 38145830 38149016 Phco8g02979 8 43778067 43781096 PCT