Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01919 ATGATATTACTGTTACCACCTCAGTTCGCTTCTCAAACGCGCTTGCCTTTTCCCTCCACACCCAAACTCAAGCTTGTGTCTGAAACTGATGTCTTCCCTTCATTTCTTCCTAAAGAAGTCCAAAGAATCAAAGACCCTTTTGCGAGAACTCTTGCTAACCGGATTCAGAGACTTCCCGTTTCTGTTAGGTTCTCGGAAGATCCTATCATGAGTAGTTGTGTGAAGCCGATGATGCAGAACAAGGAAAATCCAGTTGTGCTACTTCATGGCTTTGACAGCTCATGTTTAGAATGGAGATACACATATCCATTGCTTGAGGAAGCTGGTTATGAGACATGGGCTGTTGACATTCTTGGTTGGGGTTTCTCTGATCTAGAAAAACTTCCTTCATGTGATGTGGTATCAAAGCGTGATCACTTTTATCAGTTTTGGAAGTCTCACATCAGAAAGGCAATGATATTGGTTGGTCCAAGCCTTGGCTCTGCAGTTGCCATTGATTTTGCGGTCAATTATCCAGAAGCTGTGGAAAAGCTTGTTTTGATTGATGCTAGTGTGTATGCTGAAGGAACAGGAAACCTAGCAACCTTACCAAGAGCAGCAGCCTATGCTGGGGCATATGTATTGAAGAGCATTCCATTACGCTTATATGCTAACTATTTGAGCTTCACAAACTTGTCTTTCAGTACCAGCCTCGATTGGACTAATGTGGGTCGCTTGCATTGTTTATTGCCATGGTGGGAGGATGCTACAGTTGATTTTATGACTAGTGGTGGTTATAATGTTGTCTCCCAGATAAAAAAGGTAAAGCAGAAAACTCTAATCATTTGGGGGGAGAATGACCGCATAATCAGCAGTAAGCTTGGTGTGCGACTGCATTGTGAATTGCCTGATGCCATTATACGCCAAATACCCGATTGTGGTCACCTTCCTCATGTTCAAAGACCAGATTCTGTTGTCAAATTCATTGTTGAATTTGTTCAGAACAAGACCAAGACAGCAAATGAATGCGTTTCACCTTTGTGA 1023 0.4252 MILLLPPQFASQTRLPFPSTPKLKLVSETDVFPSFLPKEVQRIKDPFARTLANRIQRLPVSVRFSEDPIMSSCVKPMMQNKENPVVLLHGFDSSCLEWRYTYPLLEEAGYETWAVDILGWGFSDLEKLPSCDVVSKRDHFYQFWKSHIRKAMILVGPSLGSAVAIDFAVNYPEAVEKLVLIDASVYAEGTGNLATLPRAAAYAGAYVLKSIPLRLYANYLSFTNLSFSTSLDWTNVGRLHCLLPWWEDATVDFMTSGGYNVVSQIKKVKQKTLIIWGENDRIISSKLGVRLHCELPDAIIRQIPDCGHLPHVQRPDSVVKFIVEFVQNKTKTANECVSPL 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01919 340 PANTHER HYDROLASE 19 329 - -
Phco4g01919 340 SUPERFAMILY alpha/beta-Hydrolases 83 327 IPR029058 -
Phco4g01919 340 Pfam Alpha/beta hydrolase family 85 320 IPR000073 -
Phco4g01919 340 Gene3D alpha/beta hydrolase 75 335 IPR029058 -
Phco4g01919 340 PRINTS Epoxide hydrolase signature 89 107 IPR000639 GO:0003824
Phco4g01919 340 PRINTS Epoxide hydrolase signature 168 181 IPR000639 GO:0003824
Phco4g01919 340 PRINTS Epoxide hydrolase signature 109 124 IPR000639 GO:0003824
Phco4g01919 340 PRINTS Epoxide hydrolase signature 303 325 IPR000639 GO:0003824
Phco4g01919 340 PRINTS Alpha/beta hydrolase fold signature 154 167 IPR000073 -
Phco4g01919 340 PRINTS Alpha/beta hydrolase fold signature 272 286 IPR000073 -
Phco4g01919 340 PRINTS Alpha/beta hydrolase fold signature 168 181 IPR000073 -
Phco4g01919 340 PRINTS Alpha/beta hydrolase fold signature 109 124 IPR000073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01919 Phco-Chr4 38110602 38116559 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g01919 4 38110602 38116559 Phco4g01919 4 38110602 38116559 ECH
Phco4g01919 4 38110602 38116559 Phco8g02982 8 43824049 43830093 PCT