Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01856 ATGGGATTGAACGATAAGCGCAACAATGCTGATGGGAAAGACCCGGATTTTGGAGTAATCTTTATTTCAAATAGTGAGACTAAAAGAGAATGCTTCAAGAAGGGAATATTTGGCCTCCCATCAACTGAAATCCAGTTTGTAGAGCAGATTAAAGCTGGAATGGTTTTATTCTTATATGAGTATGACAAGAGACAACTTCATGGTGTGTTCAAGGCTTCCTGTGATGGAGGTATCAATATTATTCCTAATGCCTTTGCGAAAGTGGGGAATCAATTTCCTGCTCAGGTTAAGTTTGAACCAATTTGGTTCTGTAAGCCACTCCCAGAAAAATTATTCCGTGATGCAATCAGAGAAAATTACTTTTCAGCTAACAAGTTTAACTTTGGGCTATCTGAAAATCAGGTCTATAAACTTATATATTTGTTCAGCAAGAGAAAGATAGAACCAGAGCCCCCTGGGAGACAGTTGGGCAGAACCGAATACTTGATATCAGAAAGGTACCCTTTAGGTAATGTTGGAAGATCTGTTGATCATGGAATGCAATTTGAAAGAGATCAAAGTGGGCAAGGTTTGGGTGGTAACATATCACCTGTCATAATGCATAAACACCTAGGCAATTTGGATTATAATGGTGGATTTGAATATACTGGATTAAATGCAAGTGATATTAAGCGAGGAAGGGCTGCTCAGTTTGCTGCGGTGGATAATGCAAGTGAGTATGTTTGTGACTATTCGGGATTAAAGGATGAAAGTAGGTTTATTGCATATGAGAATGAGGATTATATGAATATCTGTCACAGGCCAAACATCATTGGTGGATACCCCAAAAGTCTATGTGATGAAATTAGAATTCATGGTGAGGGAAACTTATCAAATAGTGATAGACTCATGAGTAATTCCCTTCCAGAGACGGATCAGAGGATGGTATTTTCAAATGATGGTCCTGGTCTACATAATTCCCTTCCAGAGACGGATCAGAGGATGGTATTTTCAGATGATGTCCCTAGTCTACATAATTCCCTTTCAGAGACGGATCAGAGGATGGTATTTTCAAATGATGTTCCTGGTCTACATAATTCCCATATCAACCAGTCTGGTTTTTACAGCAAGCCTATTTTGGAGCATAGTTCTTTGGTTCAAAATCAGCTTAGGCCAACTTCAACCATGATTTACCCAATGCCGACACAGCTCTTAAATAATACATGTGCAACACAAGGAAGTGCTAATTCTAAGAGGACATCCCTTCTATATGATCAAGATGTTTCTGGTTTAAATTTTAGCCAGGCATCATCTTTTGGAGTTAATGATGGTTCTAAGCCAATAATAGAAAGGATTACTCCGTTAAACAACTTCGGAAGGAATTCCCTGAGCAGTCAACCATATCGCATCCATAATAATGAACTGAAAGGCATGAACAGGTGGCACCCTGTTGACTTTCAAAATTCTGTTTTGTATAGTAGCAACAGGGATTTCGTACCTCTCAACACGGTTCAAAATTCTGACCAGTTGGCAGAATCTGTTGTTTCTGAGGCTTGCGATGACGTTCCTGCCTTGAAGTCTTTGTCATCCCCTATCCCTCCAGAAATTGGAAAGAGTAGCCGCAATCTACATGAACCCTTTTCTTCCTTGTTCCATAATCACCAACCATGGTTAGGAAACAAATTTCATTCCACAACTTTGCAAGAAAACCCAAATCATGAGATAACACTACAGAAAAGCAACGAAACATTTACTCATGATATTTCATGGGCAATTGAGGGTCATTCCAAAGAGGATGATCCACTAATCTATGAATATGATATTGGATGTGATGGTGGTACTCAAAATAATAATTCTGGTTATTCAAAACAAAAAAGTAGTGTTTTTTCTCGATTATCTTTTATGCAGGATATCAACAAACAAGATGAACACAATGATTTCCATACTTCAGTTGATGAAGTGATGGCAAGGGTTCGGCAGAGTCACAAAAAGTGGATGACAAAAAGAAAGCCCAAGCCCAAGCGCAACAAAGCTGAAAGTTTGAGGACGAGAGAGGGTGATTTCTTTGAAAATGCCTTGACTGATCGAATTATGGATTTAACTGCTGCAACTGCAGGCAATACTATCAAAACAGCCAAAAACACATGTTTTGTGGATTTCAAGCGGCGTAGCAAAGTCAGGAAACTTAGTGCTGTAAATGAGAATTCGGTGCTTGGGCAACAAAGGAGAAAAAAGTTGATCCGCCCAAATTTCAGCAAGAGTTTAACTTCTGGTGATAAGGGCATTGACCTCGATGCTTCTAAAAACTTACAACTTGAAAGTTGTAATGTCGAGGATGTTAAGGAAAGCTGCTGTGCTTTGGTTCAAACTGAGGTTAACACTAAGGCAGATGCGGAACTAAGAAACATTATTACTGAAACACATTCTGAAGACAAGAATATTAGTCATGCTAGGGGATATGCCCACAGTGATGGAGGAGAAAGCGCATCCGATAGTGCACTTGCTGTATTTAATGATAAGTCAGAATGTCTGGATAGCATTAAAGATATTAATGTACAAAACATTATTAGCGGAACACATTCTGAAGATAAGAAAACCACTCATGCCAGGGGATATGTCTGCGGTGAAGGAGGAGAAAAAGCAACCGATGGTGCTCTTACTGCATATAGTGATGAATCAAAATGTCTGGAGAACGTAACCCACAATGTTTTTGCTTCAGCCTCTTGCATAGGCAATAGTTGTCATATCAAGAAAGGTTTATGTAAGATGGATAGTATAAGTTCAGTATCTCTGAACTTAGAGTCATCGCGTTCAATTTGTCAAGAGCATCACTTGCATAAGATTGTATGTGCTGGCACAGGTTCTAATACTGACAAAGAAATGCGACAGGACTGCGGCTCCTCCTTTACTATTGAACTTAAAGATGGATCTGAAAAGCTTGTAATCGAAATTTCTGCTCCTATAAACGAAGGTTTGCATGGAATGGATAATTTAAAACAAGGTACAGACTCACTGCATTCAATATGTCAAGAGCATGATACTGGTAAGATCACATCCGCTGGCAGAGGAAGTAATTGTAAAGAACAAATGTCAAAAAGTGGCAGCTCCTTTGTTGCTGGTGTTGAAAATGGATTTGACTGTTTACAGAACCCAAACAATAATAATGGTTCAATTGTACCTTCTTTTTTATCTATGAGTGAGAGGCAAAAGTCAGTATGCTCAGATTCAGAATCAGAATCAGAATCACTGCCTTCTATTTGTCGAGAATGTCGTGTTGACAAGGGTAGATGTGCTGGCAGGGCTATTAAGACTGAAGATTGTAGATCATCCGTTACTACTGAAGTTAAAGATGAATCGGACGGTTCACAGAAATGTGGCTATACTTGTGAGGAAAAGATGATTTGA 3384 0.3904 MGLNDKRNNADGKDPDFGVIFISNSETKRECFKKGIFGLPSTEIQFVEQIKAGMVLFLYEYDKRQLHGVFKASCDGGINIIPNAFAKVGNQFPAQVKFEPIWFCKPLPEKLFRDAIRENYFSANKFNFGLSENQVYKLIYLFSKRKIEPEPPGRQLGRTEYLISERYPLGNVGRSVDHGMQFERDQSGQGLGGNISPVIMHKHLGNLDYNGGFEYTGLNASDIKRGRAAQFAAVDNASEYVCDYSGLKDESRFIAYENEDYMNICHRPNIIGGYPKSLCDEIRIHGEGNLSNSDRLMSNSLPETDQRMVFSNDGPGLHNSLPETDQRMVFSDDVPSLHNSLSETDQRMVFSNDVPGLHNSHINQSGFYSKPILEHSSLVQNQLRPTSTMIYPMPTQLLNNTCATQGSANSKRTSLLYDQDVSGLNFSQASSFGVNDGSKPIIERITPLNNFGRNSLSSQPYRIHNNELKGMNRWHPVDFQNSVLYSSNRDFVPLNTVQNSDQLAESVVSEACDDVPALKSLSSPIPPEIGKSSRNLHEPFSSLFHNHQPWLGNKFHSTTLQENPNHEITLQKSNETFTHDISWAIEGHSKEDDPLIYEYDIGCDGGTQNNNSGYSKQKSSVFSRLSFMQDINKQDEHNDFHTSVDEVMARVRQSHKKWMTKRKPKPKRNKAESLRTREGDFFENALTDRIMDLTAATAGNTIKTAKNTCFVDFKRRSKVRKLSAVNENSVLGQQRRKKLIRPNFSKSLTSGDKGIDLDASKNLQLESCNVEDVKESCCALVQTEVNTKADAELRNIITETHSEDKNISHARGYAHSDGGESASDSALAVFNDKSECLDSIKDINVQNIISGTHSEDKKTTHARGYVCGEGGEKATDGALTAYSDESKCLENVTHNVFASASCIGNSCHIKKGLCKMDSISSVSLNLESSRSICQEHHLHKIVCAGTGSNTDKEMRQDCGSSFTIELKDGSEKLVIEISAPINEGLHGMDNLKQGTDSLHSICQEHDTGKITSAGRGSNCKEQMSKSGSSFVAGVENGFDCLQNPNNNNGSIVPSFLSMSERQKSVCSDSESESESLPSICRECRVDKGRCAGRAIKTEDCRSSVTTEVKDESDGSQKCGYTCEEKMI 1127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01856 1127 ProSiteProfiles DCD domain profile. 14 144 IPR013989 -
Phco4g01856 1127 SMART dcd 13 144 IPR013989 -
Phco4g01856 1127 PANTHER DCD (DEVELOPMENT AND CELL DEATH) DOMAIN PROTEIN-RELATED 10 706 - -
Phco4g01856 1127 Pfam Development and cell death domain 18 142 IPR013989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01856 Phco-Chr4 36529437 36533051 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g01856 4 36529437 36533051 Phco4g01856 4 36529437 36533051 ECH
Phco4g01856 4 36529437 36533051 Phco8g02997 8 43981945 43990760 PCT