Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01838 ATGGAGGTTGCGCAGCGACAGTTTCGCAGTGTGATGGAGGTTGTGCGACAATTGGTTGAACGATGGTGGTTTTGCAGTGTGGTGGAGGTTGCGACTAGAGTGTGCAAAACTACAGTTGTGAAAGATACCTGTAATCCTGAGTGGAATGAAGAACTGACACTTTATGTAACAGATGTTAACATTCCGATCCTTCTGACAGTTACAGACAAAGACACTTTCACTGTAGATGACAACATGGGCGATGCAGAAATAGACTTAAAGCCATATCTTCAGTGTGTGAAGATGGAGTTGAGCGATCTCCCAGAGGGTCATATAGTCAAGAAGGTTCAACCAGAAAGGAGTAACTGCCTTGCCGAAGAGAGCAGCTGCATATGGAAAAATGATAAACTCATCCAAGAGATGACTTTAAGATTGAGAAACGTCAAGAGTGGGGAAATAACTGTGGAAATTGGGTGGGTTACTCTTCCAGATTCAAAAGGCTTATCACATGTTGAGTTTTAG 501 0.4311 MEVAQRQFRSVMEVVRQLVERWWFCSVVEVATRVCKTTVVKDTCNPEWNEELTLYVTDVNIPILLTVTDKDTFTVDDNMGDAEIDLKPYLQCVKMELSDLPEGHIVKKVQPERSNCLAEESSCIWKNDKLIQEMTLRLRNVKSGEITVEIGWVTLPDSKGLSHVEF 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01838 166 ProSiteProfiles C2 domain profile. 1 99 IPR000008 -
Phco4g01838 166 SMART C2_3c 7 98 IPR000008 -
Phco4g01838 166 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 28 96 IPR035892 -
Phco4g01838 166 Gene3D C2 domain 23 163 IPR035892 -
Phco4g01838 166 Pfam C2 domain 28 88 IPR000008 -
Phco4g01838 166 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 27 159 IPR044562 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01838 Phco-Chr4 35880202 35890521 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g01838 4 35880202 35890521 Phco4g01838 4 35880202 35890521 ECH
Phco4g01838 4 35880202 35890521 Phco5g00326 5 2760456 2762488 ECH
Phco4g01838 4 35880202 35890521 Phco2g02644 2 56143466 56145321 ECH