Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01830 ATGTCGGATTCATTTGCTAGTACCTTTCACTCTTCCACTGCAAACATCACCCACAATTCCCATGCAACCCCCAAAGTCACCAGATTATGCTCGATAGCCCAACCTTATTGTATTTGCACTCACTGTAACCACATCCTCGCCTTCAACCAGCATGTTGGTAATGTTGCAGAGGAAGGGACAAATAACACAGGGTCCCATGTGCAGTCCCAGCAAAGCACAAGGTGGAGTCCAACGCCAGTTCAGTTACTAGTCCTTGAGGAATTGTATAGACAAGGCACTAAAACACCATCAGCTGAACAGATTCAACAAATAGCTTCACAGTTGCGCCAGTTTGGGAAGATTGAAGGGAAGAACGTGTTCTACTGGTTCCAGAATCACAAGGCGAGAGAGAGACAGAAGAGGCGCCGCAGGGAGATGGAGGAAAATAATGCTGCTGCTTCTAGTGAAGGGTTGAAAGAGACAGGTTGTGGAGTTAAAGAGACAAAGAAGTGGGCATCCACTTCAAACTGCAGTCGACATGCAGAGGAATCTGCTGCACGGGATATAGCAGAAAAGGGCTCTCATGGGTGCACTCAGTTTGAGGAGAGAGGCATACAAGTTTTGAGGAGAAACATAGCAGAAAGGAAGTTGCAATTGCAAGACAACATGGAAATGCCTTGTTTCCCTCCCACTACTATGGCAGCTCTCGCAACTTCACACAGAACACTTAACGCACAACTTAGTTACAACAGAGAAAGTTTAAACTACTATGATGGAGAAAATGCAGACCCTCGAACCCTTGATCTATTTCCACATAAGAGGGATGACCAAGATGACATTTGTCTTGCTGAGAGGAAATCTATGTTCTGTGCCAGTGCTTCTATGGACACTGATATCACCTCAAGCCAGTATTTTGAGTTTCTTCCTTTAAGAAACTGA 918 0.4521 MSDSFASTFHSSTANITHNSHATPKVTRLCSIAQPYCICTHCNHILAFNQHVGNVAEEGTNNTGSHVQSQQSTRWSPTPVQLLVLEELYRQGTKTPSAEQIQQIASQLRQFGKIEGKNVFYWFQNHKARERQKRRRREMEENNAAASSEGLKETGCGVKETKKWASTSNCSRHAEESAARDIAEKGSHGCTQFEERGIQVLRRNIAERKLQLQDNMEMPCFPPTTMAALATSHRTLNAQLSYNRESLNYYDGENADPRTLDLFPHKRDDQDDICLAERKSMFCASASMDTDITSSQYFEFLPLRN 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01830 305 Coils Coil 129 149 - -
Phco4g01830 305 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 54 296 IPR044555 GO:0003700|GO:0099402
Phco4g01830 305 ProSiteProfiles 'Homeobox' domain profile. 68 133 IPR001356 GO:0003677
Phco4g01830 305 CDD homeodomain 73 128 IPR001356 GO:0003677
Phco4g01830 305 Gene3D - 56 147 - -
Phco4g01830 305 SMART HOX_1 70 137 IPR001356 GO:0003677
Phco4g01830 305 SUPERFAMILY Homeodomain-like 66 136 IPR009057 -
Phco4g01830 305 MobiDBLite consensus disorder prediction 130 153 - -
Phco4g01830 305 Pfam Homeodomain 72 132 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01830 Phco-Chr4 35420476 35422398 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Phco4g01830 Homeodomain 3.6e-19 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g01830 4 35420476 35422398 Phco4g01830 4 35420476 35422398 ECH