Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01820 ATGGACCCTAATGCTACGCAGCATTCTCGTTGCCTAGAGATGGCCATGGAAGTGCACCAAGTTGTTCCACCACCCCACAAGACCACCTTCCACAAACTCAAGGCCAGGCTCAAAGAAACCTTTTTCCCTGATGACCCTCTTCGCCAATTCAAGGGACAGCCACTCAAAACAAAACTAATTCTTGGAGCTCAATATCTCTTCCCTATTCTTCAATGGGGTCCTAAGTACAGCCTCAAACTCTTCAAGTCTGATCTTGTTTCTGGCCTCACTATTGCTAGCTTGGCCATCCCACAGGGAATCAGTTATGCCAAGCTTGCAAATCTTCCTCCAATTGTGGGACTTTATTCCAGTTTTGTCCCACCGCTTGTTTATGCTGTTCTTGGAAGCTCAAGGGACCTAGCTGTAGGACCTGTGTCTATTGCTTCTCTTGTGATGGGATCGATGCTAAGACAGGAAGTGTCTCCCACAGCAGACCCAGTTCTGTTTCTTCAACTAGCTTTTACTTCAACTTTCTTTGCTGGTCTCTTTCAAGCTTCACTTGGAATCCTAAGGCTTGGTTTTATAATTGATTTTCTGTCTAAGGCCATTCTGATTGGGTTTATGGCTGGAGCAGCTATTATTGTCTCCCTGCAGCAGCTTAAGAGTCTGCTTGGAATCACAGATTTCACTAATCAGATGGGACTGATTCCTGTGATGACTTCTGTTTTTCACAATATACATGAGTGGTCATGGCAAACAATACTGACGGGGATTTGCTTTCTAGTGCTACTACTATTAGCAAGACACGTTAGCATAAAAAGACCAAAGTTATTTTGGGTCTCAGCTGGAGCTCCCCTTTTTTGTGTCATCATTTCCACCCTTCTAGTTTTTTCAATTAAGGCTCAAAATCATGGCATTAGTGTGATTGGCAAATTGCAACAAGGGATAAATCCTCCTTCATGGAATATGTTGCGTTTTCATGGAACTCACTTAGGCCTTGTTATGAAAACAGGGCTTATCACTGGCATTTTGTCTCTCACTGAAGGTATTGCAGTAGGAAGAACATTTGCAGCTTTAAAAAACTACAGAGTGGATGGAAACAAGGAAATGATGGCAATTGGGTTTATGAATGTGGTTGGTTCCTCCACTTCCTGTTATGTTACAACAGGTGCTTTCTCTCGGTCAGCTGTTAACAACAATGCAGGTGCAAAAACAGCTGTGTCAAATGTAGTGATGTCTGTGACAGTCATGGTGACACTCCTTTTTCTGATGCCATTGTTCCAATACACACCTAATGTTGTGCTAGGTGCAATCATAGTCACTGCAGTAATTGGTCTCATTGATCTCCCTGCTGCTTATAACATTTGGAAGATTGACAAATTCGATTTCCTTGTGATGTTGAGTGCTTTCATGGGTGTTCTTTTCATCTCTGTCCAAGGAGGCCTTGCTCTTGCTGTTGGGTTATCAACTTTCAAGATACTGATGCAAATTACAAGGCCGAAAACAGTAATGTTGGGGAAGATTCCAGGAACAGACATATATAGAAATATTCATCAGTATAAGGAAGCTGTGAGAGTACCTGGTTTTCTTATTTTGAGTATTGAGGCTCCCATCAATTTTGCTAACATCACATACCTTAATGAGAGAACATTACGATGGATAGAAGAAGAGGAAGACAACATAAAAGAACAATTTAGCCTTCGATTCTTAATACTGGAAATGTCAGCTGTGAGTGCCATTGACACAAGCGGAATCTCACTTTTCAAAGAGTTGAAAGCAACTTTGGAAAAGAAGGGAGTTGAGCTTGTGTTGGTGAATCCTCTCGCCGAGGTCATTGAGAAGCTGAAAAAAGTTGATGAAGCTACTGATTTCATACAAGCAGATAGCCTTTTCTTGACAGTTGGGGAGGCTATAGCTTCACTTTCATCAACAATGAAGGGTCAATCATCAGTCTTTCTTGGATAA 1944 0.4187 MDPNATQHSRCLEMAMEVHQVVPPPHKTTFHKLKARLKETFFPDDPLRQFKGQPLKTKLILGAQYLFPILQWGPKYSLKLFKSDLVSGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLVYAVLGSSRDLAVGPVSIASLVMGSMLRQEVSPTADPVLFLQLAFTSTFFAGLFQASLGILRLGFIIDFLSKAILIGFMAGAAIIVSLQQLKSLLGITDFTNQMGLIPVMTSVFHNIHEWSWQTILTGICFLVLLLLARHVSIKRPKLFWVSAGAPLFCVIISTLLVFSIKAQNHGISVIGKLQQGINPPSWNMLRFHGTHLGLVMKTGLITGILSLTEGIAVGRTFAALKNYRVDGNKEMMAIGFMNVVGSSTSCYVTTGAFSRSAVNNNAGAKTAVSNVVMSVTVMVTLLFLMPLFQYTPNVVLGAIIVTAVIGLIDLPAAYNIWKIDKFDFLVMLSAFMGVLFISVQGGLALAVGLSTFKILMQITRPKTVMLGKIPGTDIYRNIHQYKEAVRVPGFLILSIEAPINFANITYLNERTLRWIEEEEDNIKEQFSLRFLILEMSAVSAIDTSGISLFKELKATLEKKGVELVLVNPLAEVIEKLKKVDEATDFIQADSLFLTVGEAIASLSSTMKGQSSVFLG 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01820 647 Gene3D STAS domain 492 636 IPR036513 -
Phco4g01820 647 Pfam STAS domain 513 630 IPR002645 -
Phco4g01820 647 NCBIfam sulfate permease 68 630 IPR001902 GO:0016020|GO:0055085
Phco4g01820 647 CDD STAS_SulP_like_sulfate_transporter 513 627 - -
Phco4g01820 647 SUPERFAMILY SpoIIaa-like 518 634 IPR036513 -
Phco4g01820 647 FunFam Sulfate transporter 31 492 637 - -
Phco4g01820 647 ProSiteProfiles STAS domain profile. 512 634 IPR002645 -
Phco4g01820 647 Pfam Sulfate permease family 81 461 IPR011547 GO:0016020
Phco4g01820 647 PANTHER SULFATE TRANSPORTER 28 634 IPR001902 GO:0016020|GO:0055085
Phco4g01820 647 ProSitePatterns SLC26A transporters signature. 110 131 IPR018045 GO:0008271|GO:0008272
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01820 Phco-Chr4 35039438 35046574 Dispersed/Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g01820 4 35039438 35046574 Phco4g01820 4 35039438 35046574 ECH