Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01815 ATGGGGAAAAGACAAATCCCAGACCCTCCTACCTTGAAGAAGTACGGCGTTCCTTTCTACTCCGTTGCTTGGATTCCCCAACATCTTATCAAATCGCGCCAAATTGAAACTGCCGATGATTCCTCCGACTCCGATCGTAACTCTGCGCCCTCAACCGAACCGGAGTCAGAGCCGGCGACTAAGGCGGAGTCGGAGCCTTCGTCAATCGCCGGTAACTACCTGCTGTTCGCCGGTGGCGGTGGAGCAGGTCGCAGCGGTATTCCTAATGCTTTGGTGATTGCGCACTTCGATATTGAGTCTAATTCTCTCTCTAGCGAACCGGTGTGTAAGTTAGGAACTGATTCCGAGTTGCCTTATAGGATGGCACTTCAATCTCAGGGTGATGGCCTTATTTGTGCAATGGAAACGCCAAAGGTTTGCAGATGGTTTGATTGGGATCATCAAAACAAGAACTCTGAAATTCATAAGTTGAGTCTGAAGTTGTCAGATAAAGTGCTCACACAATTGGAGGATGTTGGACAGCAATTAGCATTAGCATTCAACAATGATGGTACTGCACTAGCTGCTGGTGGGGAGGATGGTAATCTAAGGGTTTTCAAGTGGCCTAGCATGGAAGTTATTCTCAACGAGTCTAATGCTCATTCTTCTGTGAAGGACTTACATTTCAGTTCTGATGGTAAATTTCTTGCCTCTTTGGGAAGTGGTGGCCCCTGCAGGGTTTGGGACATTTCTTCATCAATGGTCTTATCTTCTCTACCAAATGAAAATCGTGAAACTTTTAGCTCTTGCAGATTTTCTCTAACAAATGACAAGACTCAGGTTCTGTATATTGCTGCCATGACAGAAAAAGGTGGAAGCATCCTTACCTGGAATACACAAACATGGGAAAGGATGGGCTCAAAGTATATTATTCGTGATGCAATCTCTGCATTTAATGTCTCAGCTGATGGAAAGATTCTTGCATGTGGAACACCTTCTGGAGACATTGTAATTGTAAATTCAACAAATATGCGGATTCAGACAATGATAAAAAAGGCTCACCTTGGCATAGTAACTGCTTTAGCATTCTCCCCTGATTCAAGGGCTTTGGCTTCAGTATCAATGGATTCAAGTGCAAGGGTAACAATAATTGAAGAGAAGACAACTGGAGGGCTGAGCTTGTGGATTGCCGTATTTATCATCCTACTTGCTATTGCTGCTTACTTTCTCCAGCAAGGAATTGAAAACTGA 1230 0.4431 MGKRQIPDPPTLKKYGVPFYSVAWIPQHLIKSRQIETADDSSDSDRNSAPSTEPESEPATKAESEPSSIAGNYLLFAGGGGAGRSGIPNALVIAHFDIESNSLSSEPVCKLGTDSELPYRMALQSQGDGLICAMETPKVCRWFDWDHQNKNSEIHKLSLKLSDKVLTQLEDVGQQLALAFNNDGTALAAGGEDGNLRVFKWPSMEVILNESNAHSSVKDLHFSSDGKFLASLGSGGPCRVWDISSSMVLSSLPNENRETFSSCRFSLTNDKTQVLYIAAMTEKGGSILTWNTQTWERMGSKYIIRDAISAFNVSADGKILACGTPSGDIVIVNSTNMRIQTMIKKAHLGIVTALAFSPDSRALASVSMDSSARVTIIEEKTTGGLSLWIAVFIILLAIAAYFLQQGIEN 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01815 409 SMART WD40_4 162 200 IPR001680 GO:0005515
Phco4g01815 409 SMART WD40_4 294 333 IPR001680 GO:0005515
Phco4g01815 409 SMART WD40_4 335 376 IPR001680 GO:0005515
Phco4g01815 409 SMART WD40_4 204 242 IPR001680 GO:0005515
Phco4g01815 409 FunFam SEC12-like protein 2 66 381 - -
Phco4g01815 409 ProSiteProfiles Trp-Asp (WD) repeats profile. 344 374 IPR001680 GO:0005515
Phco4g01815 409 Gene3D - 58 382 IPR015943 GO:0005515
Phco4g01815 409 MobiDBLite consensus disorder prediction 44 66 - -
Phco4g01815 409 PANTHER PROLACTIN REGULATORY ELEMENT BINDING PROTEIN 11 404 IPR045260 GO:0005085
Phco4g01815 409 ProSiteProfiles Trp-Asp (WD) repeats profile. 210 251 IPR001680 GO:0005515
Phco4g01815 409 MobiDBLite consensus disorder prediction 34 66 - -
Phco4g01815 409 Pfam WD domain, G-beta repeat 177 199 IPR001680 GO:0005515
Phco4g01815 409 Pfam WD domain, G-beta repeat 213 242 IPR001680 GO:0005515
Phco4g01815 409 Pfam WD domain, G-beta repeat 345 374 IPR001680 GO:0005515
Phco4g01815 409 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 70 373 IPR011047 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g01815 4 34911816 34917862 Phco4g01815 4 34911816 34917862 ECH