Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01814 ATGGATGATGAAGTTGTTCAGCGAGTGTTCCATGAAGGAGGACGCGATTACTTCCAGCAACAGCCTTCAACTTCTTCGTCTTCGTCTTCCATCCTCCAATCTCTCCCTCTCCATGTGTCTTTCGATCATGGATATTATTTGTTGGTAAAATCTATTCAAGAACTCCGAGAGAAAAAGGATGGCCTTGTTACTGTTGGCATTGGTGGTCCAAGTGGATCTGGTAAAACAAGCTTAGCAGAAAAGGTGGCATCTGTTATTGGTTGTACTGTTATATCAATGGGGAATTACCGTCATGGGGTTGATGAAGGGAATGATGTGGATTCTATAGATTTTGATACGCTGATCAAGAATCTTGAGGATTTGATTAAAGGCAAGGATACATTAATCCCCAAGTTTGACTATCAGCAAAAGAAGCGCATTGGCTATAAAGCAATAAAGAGTGCTTCATCTGGGGTGGTAATAGTTGATGGCACATATGCATTGCATGCAAAACTGCGGTCTTTACTGGACATTCGAGTTGCTGTGGTTGGTGGTGTTCATTTTAGCTTGCTTTCTAAAGTTCGCTACGACATTGGAGATTCTTGTTCACTGGATTACCTTATAGATAGCATTTTTCCACTGTTTAGAAAACACATTGAGCCAGATCTTCATCATGCACAGATCAGAATTAATAACAGCTTTGTCTCATCATTCAGAGAGGCAATCTACAAGGTTAAATGCAGAAGGGAGTCTACAGATGGACATCCAGGTTCTGCTTTTCAAGGAAATGAAGCCCAAACTGACAATTTTATTGAAATGTACCTTAGACCACCTTCATCTAGTGAAGAAGCAAGGATAAATGATTGGATCAAAGTGCGGCAGTCTGGAATTAGATATTATCTATCACTTGGTGACCAGAGGATTGTTGACAAGAATTTCATTATCAGGCCTAAAGCTGAATTTGAGGTTGGTCGAATGACATTGGGTGGATTGTTGGCTCTTGGGTATACTGTTGTGGTTAGTTATAAGCGTGCATCCACAGCTATCAATAGTGGCAAGGTTACCATGTCTTTTGAGACCATTGATGTTCTTGGTGAGACATTTATGGTGATGAGAGGAACTAATAGAAAGACAGTTGGAACAGAAGCATCAAGGATGCGTATTGATGGACCTTGGATTACTAAATCATATCTGGAAATGATTCTGGAGAGAAAAGGTGTACCTCGTCTGAGTACTCCACCACTTGTGTCTAATACAACTGTGGCTGGTAGTCAAGAAACAGCAATCACTGCACCAAAGCCAATCCGTGTTACTCCTAATGTTGTTACTGGGCTTGAGGATTTACCTCAGCCATGGACTCGATCCCCGACAAAATCTAAAATGGAACCTGTTGTTGCTGCATGGCATTTCTTATCTTCCGATTCCTCCCAGCCTGACAATTCAGTCCTAGACTTCTCTCATGAAGCAACCACAGATCCTTCATCTTTCAGGGATAGTATTAGGCTTGCTCCAATGCCTGATTCATTTGATTTGGACAGGGGATTGCTTTTGGCTGTTCAAGCAATACAAGTAAGGAGCAAAGGCTTGGAAATTTCTTCTGTGTCTTATGTTTTGAAGATTACAATTGCACAGGACATTCATATTTATGAGTTTGATGGAATCCTATTTGCTTATTTATCTTTGTTCCAGGCATTATTGGAGAATAAAGGTGTCCCAGTCATAGTTGGAATTGGAGGTCCAAGTGGGTCTGGGAAGACTAGTTTGGCTCATAAAATGGCAAATATAATTGGTTGTGAAGTAGTTTCCCTGGAAAGCTATTATAAACATGTAAAGGATTTTAAATATGACGACTTCAGTGCACTTGATTTATCTTTGCTATCGAAGAACATTGATGACATAAGAAATGGTCAAAGAACAAAAGTACCTATATTTGACTTGGAAAGTGGTGCTCGAAATGGTTTCAAGGAACTTGAAGTTTCTGAAGATTGTGGAGTGATTATATTTGAAGGCGTCTTTGCTTTGCATCCTGATATCCGAATATCACTTGACTTGTGGATTGCTGTTGTTGGAGGTGTTCATTCACATTTGATTTCACGAGTTCAAAGGGATAAAAGTAGAGTGGGATGCTTTATTTCTCAAAATGAGATCATGATGACAGTGTTTCCTATGTTCCAGCAGCTTATTGAACCTCATCTTGTTCATGCACATCTTAAAATTCGAAATGATTTTGACCCTGTGCTTTCTCCTGAGAGTTCGTTATTTGTATTGAAGAGTAACAAAAAAGTAGCATATCAAGATATTGTTGCAATTCTTGATTCAGCAAAATTTTGCAGTTCGGTGCAGAAATTCATTGACATTTATATTAGGCTTCCTGGGATCCCTTCTAATGGACAGTTGAGAGACAGTGATTGTATTCGAGTCAGAATATGTGAAGGCAGATTTGCTTTGCTTATTCGAGAGCCCATCAAAGAAGGGAACTTTATCATTCAGCCCAAAGTGGATTTTGATATTAGCATTAGTACAGTTGCTGGCCTTCTTAATCTTGGGTATCAAGCATTTGCTTATATTGAAGCATCTGCATTCATCTATCAAGATGGAAAGATTTTAATTGAGGTTGATCACCTTCAAGATGTACCTGGCCCATACATTCAGATAAAGGGTGTTAATAAAGATGCAGTAGCAGCAGCTGGTTCAATGCTTAAATTGGATACTTCATATACGACTAAGAGTTATCTTGAAATAATTTTGGAAAGACTACCGATGATTGAAAGAACTTCTGGTGGGATTAATTCTCAACAATCAGCAAGGCTGCTAGAGATTGTTGAATTTATTCAATCTCAGGGGAGTAGCTCTGCTTCAGAATCCTCATCAGGTAGGGTAGTCTCTCCAATTGAAGGGATTATTGAGGAGATGCAATCAAGGATTAAAAGGCTTGAAAGGTGGCTAGCGATTAATACGGTCCTATGGACATTTCTGATGTCTGCCCTTGTTGGTTATTCACTGTATCAAAGGAGGCGTCAATAA 3003 0.3949 MDDEVVQRVFHEGGRDYFQQQPSTSSSSSSILQSLPLHVSFDHGYYLLVKSIQELREKKDGLVTVGIGGPSGSGKTSLAEKVASVIGCTVISMGNYRHGVDEGNDVDSIDFDTLIKNLEDLIKGKDTLIPKFDYQQKKRIGYKAIKSASSGVVIVDGTYALHAKLRSLLDIRVAVVGGVHFSLLSKVRYDIGDSCSLDYLIDSIFPLFRKHIEPDLHHAQIRINNSFVSSFREAIYKVKCRRESTDGHPGSAFQGNEAQTDNFIEMYLRPPSSSEEARINDWIKVRQSGIRYYLSLGDQRIVDKNFIIRPKAEFEVGRMTLGGLLALGYTVVVSYKRASTAINSGKVTMSFETIDVLGETFMVMRGTNRKTVGTEASRMRIDGPWITKSYLEMILERKGVPRLSTPPLVSNTTVAGSQETAITAPKPIRVTPNVVTGLEDLPQPWTRSPTKSKMEPVVAAWHFLSSDSSQPDNSVLDFSHEATTDPSSFRDSIRLAPMPDSFDLDRGLLLAVQAIQVRSKGLEISSVSYVLKITIAQDIHIYEFDGILFAYLSLFQALLENKGVPVIVGIGGPSGSGKTSLAHKMANIIGCEVVSLESYYKHVKDFKYDDFSALDLSLLSKNIDDIRNGQRTKVPIFDLESGARNGFKELEVSEDCGVIIFEGVFALHPDIRISLDLWIAVVGGVHSHLISRVQRDKSRVGCFISQNEIMMTVFPMFQQLIEPHLVHAHLKIRNDFDPVLSPESSLFVLKSNKKVAYQDIVAILDSAKFCSSVQKFIDIYIRLPGIPSNGQLRDSDCIRVRICEGRFALLIREPIKEGNFIIQPKVDFDISISTVAGLLNLGYQAFAYIEASAFIYQDGKILIEVDHLQDVPGPYIQIKGVNKDAVAAAGSMLKLDTSYTTKSYLEIILERLPMIERTSGGINSQQSARLLEIVEFIQSQGSSSASESSSGRVVSPIEGIIEEMQSRIKRLERWLAINTVLWTFLMSALVGYSLYQRRRQ 1000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01814 1000 Gene3D - 564 741 IPR027417 -
Phco4g01814 1000 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 541 735 IPR027417 -
Phco4g01814 1000 Gene3D - 63 243 IPR027417 -
Phco4g01814 1000 CDD UMPK_like 64 226 - -
Phco4g01814 1000 Gene3D - 750 912 - -
Phco4g01814 1000 SMART AAA_5 564 708 IPR003593 GO:0016887
Phco4g01814 1000 SMART AAA_5 61 211 IPR003593 GO:0016887
Phco4g01814 1000 Pfam Phosphoribulokinase / Uridine kinase family 106 223 IPR006083 GO:0005524|GO:0016301
Phco4g01814 1000 Pfam Phosphoribulokinase / Uridine kinase family 567 732 IPR006083 GO:0005524|GO:0016301
Phco4g01814 1000 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 176 IPR027417 -
Phco4g01814 1000 CDD UMPK_like 567 735 - -
Phco4g01814 1000 SUPERFAMILY CYTH-like phosphatases 760 907 IPR033469 -
Phco4g01814 1000 PANTHER URIDINE KINASE 10 270 - -
Phco4g01814 1000 PRINTS Uridine kinase signature 565 582 - -
Phco4g01814 1000 PRINTS Uridine kinase signature 592 603 - -
Phco4g01814 1000 PRINTS Uridine kinase signature 686 696 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01814 Phco-Chr4 34880801 34909952 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g01814 4 34880801 34909952 Phco4g01814 4 34880801 34909952 ECH
Phco4g01814 4 34880801 34909952 Phco8g01452 8 15004972 15016068 PCT