Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01812 ATGAATAGGCTTTACACGTCGCAGTTCGAACATGAGGAGCTTATGGACCGGAGTAACAAACTATCGGATTTGAGGCAACAACTACTCGATTTTCCACTTGGCATTGAAACGAACATGGTTGAAAATCCCACTTCATCAAAAACCATCTCCTCTTCTTCTGCTTATCTATGCCTGTCTGCTTCACAATCAAGCCATTCATTCCCCAAAGAAGCCATCCCCACCAGGTCTGGTTACCTTCCAGTCAACCCTACTTCTGCTTCTGCAATTTACTATGCCTTCTATGAAGCCCAAAACTCCACTTTGCCTCTCTACCAAACCCCACTTCTCATTTGGCTCCAAGGTGGCCCTGGCTGCTCCTCCATGATTGCCAACTTCTATGAGCTTGGACCCTGGCGAGTCACCCAATCCCTCACCCTTCACCGCAACCCTGCTTCTTGGAACAGAATTTTTGACCTTCTTTTTCTTGATAATCCCATTGGATCTGGCTTCAGTGTGGCTTCAACCCCAGAAGAGATCCCAACAGATCAAAACGCCGTTGCCAAACACCTCTTCGCTGCTATAACCAACTTTCTTCAACTCGATCCTCTTTTCAAGCATCGCCCTATTTATATTACTGGAGAAAGCTATGCTGGGAAGTATGTGCCTGCAATTGGGTACTATATATTGAAGAAAAATGAAAAGTCGGAGGCTTCCGAAAGAGTGAATCTGGCTGGTGTAGCTATTGGGGATGGGTTAACTGACCCCGAAACTCAAGTTGCCTCTCATGCTGTGAATGCTTATTATGCTGGATTGATCAATGAGAGGCAGAAGAGAGAGTTGGAAAAAGTTCAATTGGAAGCCGTTGCGTTGACCCAGATGAGGAATTGGAGTGAAGCAACAGATGCGAGAAACAAGGTGTTGGGAATGTTGCAGGGGATGACAGGGTTGGCTACTTTGTATGACTATACAAGGAAGAGTCCGTACGAGGATGATTTGGTGGAACGATTGTTGAACATAGGGGAGGTGAAGAAGGCCCTGGGGATGAATGAATCGTTTGTGTATGAGATATGTAGTGATGTTGTTGGGGAGGCATTGCATGGGGATGTGATGAAAAGTGTGAAAGATATGGTGGAATACTTGGTGAGGAGGAGCAGGGTGTTGTTGTATGAAGGTGAGTATGATTTGAGGGATGGTGTGGTCCAAGCAGAGGTGTGGGTGAAGACAATGAAATGGGAAGTGATAGAGAAGTTTCTGAATGCTGAAAGGAAGATATGGAAGGTGAATGGAGAGCTTGCTGGTTATGTACAGAATTGGAAGTCTCTCACCAATGTTGTGGTTTTGGGAGCTGGTCATCTTCTGCCCACAGACCAGCCTCGTAATTCTCAAGCTATGATAGAAGATTGGGTTCTTCAAACGGGTTTCTTTAAAAGCGTGTAG 1416 0.4562 MNRLYTSQFEHEELMDRSNKLSDLRQQLLDFPLGIETNMVENPTSSKTISSSSAYLCLSASQSSHSFPKEAIPTRSGYLPVNPTSASAIYYAFYEAQNSTLPLYQTPLLIWLQGGPGCSSMIANFYELGPWRVTQSLTLHRNPASWNRIFDLLFLDNPIGSGFSVASTPEEIPTDQNAVAKHLFAAITNFLQLDPLFKHRPIYITGESYAGKYVPAIGYYILKKNEKSEASERVNLAGVAIGDGLTDPETQVASHAVNAYYAGLINERQKRELEKVQLEAVALTQMRNWSEATDARNKVLGMLQGMTGLATLYDYTRKSPYEDDLVERLLNIGEVKKALGMNESFVYEICSDVVGEALHGDVMKSVKDMVEYLVRRSRVLLYEGEYDLRDGVVQAEVWVKTMKWEVIEKFLNAERKIWKVNGELAGYVQNWKSLTNVVVLGAGHLLPTDQPRNSQAMIEDWVLQTGFFKSV 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01812 471 Coils Coil 266 286 - -
Phco4g01812 471 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 75 451 IPR001563 GO:0004185|GO:0006508
Phco4g01812 471 ProSitePatterns Serine carboxypeptidases, serine active site. 204 211 IPR018202 GO:0004185
Phco4g01812 471 Gene3D alpha/beta hydrolase 55 468 IPR029058 -
Phco4g01812 471 PRINTS Carboxypeptidase C serine protease (S10) family signature 434 447 IPR001563 GO:0004185|GO:0006508
Phco4g01812 471 PRINTS Carboxypeptidase C serine protease (S10) family signature 190 215 IPR001563 GO:0004185|GO:0006508
Phco4g01812 471 PRINTS Carboxypeptidase C serine protease (S10) family signature 142 154 IPR001563 GO:0004185|GO:0006508
Phco4g01812 471 PRINTS Carboxypeptidase C serine protease (S10) family signature 155 165 IPR001563 GO:0004185|GO:0006508
Phco4g01812 471 Pfam Serine carboxypeptidase 73 462 IPR001563 GO:0004185|GO:0006508
Phco4g01812 471 SUPERFAMILY alpha/beta-Hydrolases 73 463 IPR029058 -
Phco4g01812 471 FunFam Carboxypeptidase 58 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01812 Phco-Chr4 34789228 34791944 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g01812 4 34789228 34791944 Phco4g01812 4 34789228 34791944 ECH