Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01791 ATGGGTAAGAGGGAAGTGGCGTTGTTGTTTGAGATGCGAGCGGATCGGTTAGCTTTGTGGGGTCTCATTAGCATTTCAAAGTTTCGTGCTTTTCCTGTTTTGCTGGGTTTGGAGACAGATTCTCATACTTGGTTTGTGGTATTTGAAATAGAAACATTGTTTCTCCGTGGGTCTTGTGGTTCTTTTGTTCTTTGTTGGGTCATTACATCTTATATGGGAATACCTGATAGCTCACTATTAGATCTAGAAAAAGTAAGGTCTTGGGTTTCTTGGGGAGAAAGTGATTTGTGTTATTTGTCTGAGAAATTTGATATGCACCATAGCGGAAGCAAAATGTGTTGTGTGTGCAATAGGAATTTCACTGAGATGACTCAGCAGCACAGATACAATTGCAAAAGCTGTGGCCGTTGGTTCTGTGGGAAATGCATCGGGGTTTGTGATCTCCCAAATCTTGAATCTGAGAACATGGGATTCAGGGAAACTATTCGTTCCTGCAAGTTTTGTTTAGATGCCAATAGGAGGATGTGTTATGAGGGCCAGAGGAAGTGTAGTGAGAAAGTGCACCCTTCTGTCTCTCCTCAAGAGAGTCCAAGACAAAGTCCTGAGCCACCTTCTCCATGCTTTAGTGTTGAAAGTGATAAGATCAGTTCTCCTCTGAATGCTGAATTGAATCTGGGATCTCACTTTGAACGCTGTTTTCATGACCATGATTATGGGTATTATCCTTGTTCTGAAGTCAACAAGAGTTTGACTTCATCTGGTACTCACCCTTCGTCACTATCTACTCATCCATCTACCTTCAGGAGTGACGAAGAGGGGATGGAGGATCCTAGGAAGGACTTTCTCAGCCAATCACGTACATATTGTGATAATTATTCAGATATAGATTCAAGTAGCGTTAGTGCTAGACATGACACTTACAACTATAATTCTGTGGGGTCAAGTCCTTCAGATAGCCCTTCTAGGATTGGTTTTACTTCTAGTTGGGCTGGGCTTCCTGTACAGAAGGATCAGGAGAAAAGCCCCGTCCCTCAGAATGATGTTCCCTTTAGTCAACAAAGTATGGCTGTTTTAAGAAAGCCTGAACAAGGGACTGAGGATGCATATACAACTGCTTATTTTTCAGATGACTTGTCTATTTTCCGGAAGAATGAGACTTTGCAGAGGCCATTGGATTTTGAAAACAATGATCATATATGGTTTCCCCCACCACCTGATGATGAAAATGATGATGCAGAAGGAAATTTCTTTGCATATGATGATGAGGATGATGATATTGGTGACTCAGGGGCCATGTTCTCATCCAGTAGCAGTCTATCTAATATGTTTCCTGGAAAGGAGAAACATAATGATGGAAACAAGGAACCTTTAAGAGCTGTAATCGAAGGACATTTTAGAGCCCTTGTTTCACAGCTTTTACAAGGAGAGGGAATTAATGTTGGTAAGGAAAATGATTCTGAGGACTGGCTTGACATAGTTGCAACGGTAGCTTGGCAGGCTGCTAACTTTGTGAGGCCAGATACGAGCAAAGGTGGCAGTATGGATCCTGGTGATTATGTAAAGGTCAAATGTATAGCCTCTGGAAGCCCAAGTGAGAGCACCCTTATCAAAGGTGTAGTTTGTACAAAAAATATTAAGCACAAGCGCATGACCTCTCAATACAAAAATCCTAGACTACTCCTTTTAGGAGGAGCTCTGGAATATCAGAAAGTTCCAAATCAATTGGCTTCTTTTGATACATTGTTACAGCAGGAAAATGATCATTTGAAGATGATCATTTCAAAAATTGAGGCTCTTCGACCAAATGTTTTGCTGGTAGAAAAAACTGTAGCTTCGTGTGCCCAGGAATATTTGCTTGCAAAGGAAATCTCCTTGGTGTTAAATGTCAAAAAGCCTTTGCTGGAGCGAATAGCTCGATGCACTGGTGCTCTTATCACTCCATCAGTGGATAATTTATCTAAAGCACGACTGGGACACTGTGAGTTGTTCCGGTTAGACAGACTGGTGGAAGATCATGAGACTGCTAATCAGTTAAACAAGAAGCCATCCAAAACATTAATGTTTTTTGAAGGTTGTCCACGGCGATTGGGTTGCACGGTCTTGCTGAAGGGCACATGTCGAGAAGAACTAAAGAAAATTAAGCATGTTGTGCAATTTGCAGTTTTTGCGGCCTACCACTTATCTCTTGAGACCTCATTCCTTGCTGATGAGGGTGCTTCCCTACCAAAAATGATAGTAAAATACTCTACTGACATGCCTGAGAGTGCAACTGCTGACACTGATATTTCTATGATACCTAACACCCTTTCTACAACCATGCCCCAATCAGAGCCTGACGAGACTTCTAGAGTGAAGGACATTGTTGGCATTGGTTTAAAGCTTGAAAATTTGGGATCTGTGCCGGAGCATCTTGATGATCTTAGTTGTCATTCATATCCAGACACCATGGCAGATTATAGATCTGAGAGTGTACTCTCTGATTCATGCTATAATAATTTAACTTCTAATTTGACTGTGGATTCTGATTATATACATCCGAGCAATGAATCAGATGCGGACACTATTTTTAGTACCAGAGAACTTTTGCAATCAGGTTTGCTTGAAACCATGGTTCAAGAGGAGAGGGAGTGTGGTGAAGTTGTTGACTCAACAAAAGACAAGACTAACGAGGATGAGCTTTCTGGTGAATACTTTTCTGCCACTGATGGTCATCAAAGCATATTGGTATACTTTTCAAGTCATTGTGTTTCAAAAGGAACTGTATGTGAACGTACTAGGTTGCTGCGCATAAAATTTTATGGCTCTTTTGATAAGCCTCTTGGAAGATATCTTCGTGATGATTTGTTTGATCAGGCATGCTGCTGTCAGTCTTGTAAAGAGCCAGCAGAGGCTCATGTCCTTTGTTTTACTCACCAACAAGGAAATCTCACAATCAATGTTAAGCGCCTTCCCTCTGTGAAGTTACCAGGGGAAAGAGACGGCAAGATTTGGATGTGGCACCGGTGTCTGAGGTGTCCATTTGAGGATGGAGTTCCACCAGCAACTCGTAGAGTTGTCATGTCAGATGCGGCTTGGGGATTATCTTTTGGAAAGTTCTTGGAGCTTAGTTTTTCAAACCATGCAACTGCAAATCGAGTTGCAACCTGTGGACATTCTTTGCAGAGGGATTGCCTTCGTTATTATGGGTTTGGGAGCATGGTTGCTTTCTTCCGGTATTCTCCTATTGATATTCTTTCTGTCCATCTACCCCCATCTGTGTTGGAATTTGGCCACATCCGAGAGGAGTGGATTGGAAAGGAGGCTGAAGAGCTTTTTATTAAAGTGGAAACGTTGTACGCGGAGATATCCAATGTGCTTGGACATCTGGAAACAAAGATTGTATCGCCTAGTCTTGGAAATGAATCATCAGATACATGTGACATTCAGAACCACATACTGGATCTGAAAGATATGCTTAGAAGAGAAAGAACCGATTATCATTGTTTGCTACAGTCAGGCATAGTGACCCCACAACCTGGGAAGATGGCATTAGACATTCTGGAACTAAATCGCATGAGGCGATCTCTTCTTATTGGTTCACATGTTTGGGATCACAGACTATATTCATTGGACTCTCTCATTAAAAGAAGTTTTAGCGCCAAGGTTAAACAGGAAAATGAACTTTGTGCAGATTTTAAGGAATTAATAGTTGATTCATTTCACAAGGATCCGAATATTGACTGTGGACCGGAGCAAAATAATACCCGGCTTTCAAAGTTGCATGAGTCTCACAAAAGTCATATGCTTGCTGAACCAGATGACACAGTTGAACCTTGTGCTTCGGGATCATTAACATGTTGTATTGAGGGAGAGAAAGTACATTCAGATGGGGAACTTAACAAAACATTTTCCGAGTGTTTCTCACCAAATGAGTCCAATCTTTCTGAGAAAATAGACTCTGCATGGACTGGAACTGATCAACCTCAAGCCAATGCTGTCCCTGCTGGAAGTATTCAGCCGAGTAACCAACATGATAGCCCTCCGTTAAGACGGTTGACACAGCCAATGAGAGTTCATTCTTTTGATTCAGCAGTAAGAGTTCATGAAAGAATCAGAAAAGTCTTGCCCTCATCTTTACATTTATCAACACTTAGATCCTTTCATGCTTCTGGAGATTACGGTAATATGGTCAGAGACCCTGTCTCTAACATATTGCAATCTTATGTTCAAATGTTGCCATGGGAGACACAGAAACTAAATCTGATTCTGAGCTCCACTCCAACATTCATATCCTCTGTGTCTAGCATAGCTGAAGGGGCTCGTTTGCTGCTTTCCCAAACTTATCACGGTGATAGAGTTATTGCTGTCTATGACAATGATTACTCTAGCATAATATCCTATGCCCTTAGTTCCAAGGAATATGAAGATTGGGTGTCTGGTAAGTCAGATCTGCCTGAGAGTAGCTGGATTGCTCGTGAGAGAAGCAAAGAAGATTTAGCTACTTCCAGCTTTTCTGCATGGGGTACTCTGGACTTGGATTATATCAATTATGGTAGTAGTTATAGACCTGAAGATGTTCCATCTTCTGTTGGCTCTCTTCTCCGGGACTCCAAAAAGTCCGTACACTTGCAAATTTCCTTTGGTGATGATTCTGTGGGAGCTGGAGGAAAAGTGAATTTTTCTGTCACTTGTTATTTTGCTAAGCAGTTTGAATCACTTAGAAAAAAGTGCTGCCCTAGTGAGGTTGATTTTGTGCGATCCATGAGTCGTTGCCGGAGATGGAGTGCACAAGGAGGGAAAAGTAATGTATATTTCGCCAAGTCATTGGATGAGAGGTTTATTATTAAACAAGTGACGAAGACAGAACTTGAGTCCTTTGTAGAATTTGCACCTCAGTATTTCAAATACCTGATGGATGCCCTGAACTCCGGGGGCCCAACTTGCCTAGCCAAAATTCTGGGTATTTATCAGGTCACTGTCAAATACCCAAAAGGTGGCAAGGAAACAAAAATAGATCTGATGGTAATGGAGAATCTGTTTTACAAGAGAAATATATCCAGGGTATACGATCTCAAGGGCTCAGAAAGATCTAGGTATAATCCAGACACAACTGGGACAAACAAAGTGATGCTGGACATGAATTTGTTAGAATCCTTGAGAACAAACCCAATATTTCTTGGGAGTAGGGCCAAGAGAAGACTGGAAAGAGCTGTATGGAATGACACATCCTTTTTGGCGTCTGTTGATGTTATGGACTACTCTTTGCTGGTTGGGGTGGATGATGAGCGGAAGGAGTTGGTTTTGGGGATCATTGATTTCATGAGACAATACACATGGGACAAACATTTGGAGACATGGGTGAAGGCTTCTGGGATTCTTGGGGGTCCAAGGAATGCTGCCCCCACAATAGTTTCTCCTAAACAATACAAGAAAAGATTCAGGAAGGCCATGACTACCTACTTTCTCACCTTACCTCTTGAAAATGTATAA 5469 0.4173 MGKREVALLFEMRADRLALWGLISISKFRAFPVLLGLETDSHTWFVVFEIETLFLRGSCGSFVLCWVITSYMGIPDSSLLDLEKVRSWVSWGESDLCYLSEKFDMHHSGSKMCCVCNRNFTEMTQQHRYNCKSCGRWFCGKCIGVCDLPNLESENMGFRETIRSCKFCLDANRRMCYEGQRKCSEKVHPSVSPQESPRQSPEPPSPCFSVESDKISSPLNAELNLGSHFERCFHDHDYGYYPCSEVNKSLTSSGTHPSSLSTHPSTFRSDEEGMEDPRKDFLSQSRTYCDNYSDIDSSSVSARHDTYNYNSVGSSPSDSPSRIGFTSSWAGLPVQKDQEKSPVPQNDVPFSQQSMAVLRKPEQGTEDAYTTAYFSDDLSIFRKNETLQRPLDFENNDHIWFPPPPDDENDDAEGNFFAYDDEDDDIGDSGAMFSSSSSLSNMFPGKEKHNDGNKEPLRAVIEGHFRALVSQLLQGEGINVGKENDSEDWLDIVATVAWQAANFVRPDTSKGGSMDPGDYVKVKCIASGSPSESTLIKGVVCTKNIKHKRMTSQYKNPRLLLLGGALEYQKVPNQLASFDTLLQQENDHLKMIISKIEALRPNVLLVEKTVASCAQEYLLAKEISLVLNVKKPLLERIARCTGALITPSVDNLSKARLGHCELFRLDRLVEDHETANQLNKKPSKTLMFFEGCPRRLGCTVLLKGTCREELKKIKHVVQFAVFAAYHLSLETSFLADEGASLPKMIVKYSTDMPESATADTDISMIPNTLSTTMPQSEPDETSRVKDIVGIGLKLENLGSVPEHLDDLSCHSYPDTMADYRSESVLSDSCYNNLTSNLTVDSDYIHPSNESDADTIFSTRELLQSGLLETMVQEERECGEVVDSTKDKTNEDELSGEYFSATDGHQSILVYFSSHCVSKGTVCERTRLLRIKFYGSFDKPLGRYLRDDLFDQACCCQSCKEPAEAHVLCFTHQQGNLTINVKRLPSVKLPGERDGKIWMWHRCLRCPFEDGVPPATRRVVMSDAAWGLSFGKFLELSFSNHATANRVATCGHSLQRDCLRYYGFGSMVAFFRYSPIDILSVHLPPSVLEFGHIREEWIGKEAEELFIKVETLYAEISNVLGHLETKIVSPSLGNESSDTCDIQNHILDLKDMLRRERTDYHCLLQSGIVTPQPGKMALDILELNRMRRSLLIGSHVWDHRLYSLDSLIKRSFSAKVKQENELCADFKELIVDSFHKDPNIDCGPEQNNTRLSKLHESHKSHMLAEPDDTVEPCASGSLTCCIEGEKVHSDGELNKTFSECFSPNESNLSEKIDSAWTGTDQPQANAVPAGSIQPSNQHDSPPLRRLTQPMRVHSFDSAVRVHERIRKVLPSSLHLSTLRSFHASGDYGNMVRDPVSNILQSYVQMLPWETQKLNLILSSTPTFISSVSSIAEGARLLLSQTYHGDRVIAVYDNDYSSIISYALSSKEYEDWVSGKSDLPESSWIARERSKEDLATSSFSAWGTLDLDYINYGSSYRPEDVPSSVGSLLRDSKKSVHLQISFGDDSVGAGGKVNFSVTCYFAKQFESLRKKCCPSEVDFVRSMSRCRRWSAQGGKSNVYFAKSLDERFIIKQVTKTELESFVEFAPQYFKYLMDALNSGGPTCLAKILGIYQVTVKYPKGGKETKIDLMVMENLFYKRNISRVYDLKGSERSRYNPDTTGTNKVMLDMNLLESLRTNPIFLGSRAKRRLERAVWNDTSFLASVDVMDYSLLVGVDDERKELVLGIIDFMRQYTWDKHLETWVKASGILGGPRNAAPTIVSPKQYKKRFRKAMTTYFLTLPLENV 1822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01791 1822 MobiDBLite consensus disorder prediction 1317 1341 - -
Phco4g01791 1822 PANTHER 1-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE-RELATED 100 1818 - -
Phco4g01791 1822 MobiDBLite consensus disorder prediction 187 211 - -
Phco4g01791 1822 FunFam 1-phosphatidylinositol 3-phosphate 5-kinase FAB1 1673 1815 - -
Phco4g01791 1822 CDD Fab1_TCP 466 738 - -
Phco4g01791 1822 MobiDBLite consensus disorder prediction 251 278 - -
Phco4g01791 1822 FunFam Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C 1503 1671 - -
Phco4g01791 1822 Pfam TCP-1/cpn60 chaperonin family 486 727 IPR002423 GO:0005524
Phco4g01791 1822 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 1522 1671 IPR027484 -
Phco4g01791 1822 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 1493 1814 IPR002498 GO:0016307|GO:0046488
Phco4g01791 1822 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 1590 1756 IPR002498 GO:0016307|GO:0046488
Phco4g01791 1822 SUPERFAMILY SAICAR synthase-like 1543 1814 - -
Phco4g01791 1822 FunFam 1-phosphatidylinositol 3-phosphate 5-kinase isoform X1 531 704 - -
Phco4g01791 1822 SUPERFAMILY GroEL apical domain-like 532 704 IPR027409 -
Phco4g01791 1822 CDD FYVE_like_SF 112 168 - -
Phco4g01791 1822 Gene3D - 1672 1815 - -
Phco4g01791 1822 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 107 173 IPR017455 -
Phco4g01791 1822 CDD PIPKc_PIKfyve 1551 1814 IPR044769 GO:0000285
Phco4g01791 1822 Gene3D GroEL 531 704 IPR027409 -
Phco4g01791 1822 MobiDBLite consensus disorder prediction 251 267 - -
Phco4g01791 1822 SUPERFAMILY FYVE/PHD zinc finger 105 171 IPR011011 -
Phco4g01791 1822 SMART PIPK_2 1526 1815 IPR002498 GO:0016307|GO:0046488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01791 Phco-Chr4 33641776 33649480 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g01791 4 33641776 33649480 Phco4g01791 4 33641776 33649480 ECH
Phco8g02000 8 21365484 21375155 Phco4g01791 4 33641776 33649480 PCT