Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01600 ATGGGTAAGAAGCTAGATGCTCTCCTTGGTAGAACCTTCAAGGCTGCAAAGTTCAAGGCTATTGTTAACCTTGCCATCTCACGTCTTGCTGTTCTCAAGAACCAGCGCCAGGCTCGCCTTAGAAATGCACGTTCTGATGTCCTTGAACTCCTCCAACAAGGTCACCTTGAACGTGCTTCACTTAGAGTTGAGCATGTGATCAAGGATCAGAACATGTTGGATGTGTATGACAGGATTGCAGGATACTGCAACCTCTTGATCGAAAGGAGCCACCTCATTGAACAAGAGAGGGAATGTCCCGAGGAACTGAAAGAGGCAGCATCGGGGTTGCTCTATGCAGCTTCAAGGTGTGGAGAATTTCCAGAGATTCAAGAGATTCGTGCAGTTTTGACCTCGCGGTTTGGCAAGGAATTTGCTGGTCGTTCTATTGAGTTGAGGAACAACTGTGGCGTCCATCCTCAGATGATACAAAAGCTGTCAACAAGGATGCCACGCCTGGAAAGCAGAATAAAGGTACTCAAAGACATTGCTTCTCAGAATGGTATTGTTCTGCAGCTTGAAGAAACTACTGTTTCGGTTGAGGAACAATCTGAAGTAGAAATGCAAAACCTGCATGAACCTGAGAAAAAGGAAGAGAATATAAGCATTTTGCCTAGTGGAGGGACAAATGAGGAGTTAACTAATTCCTTTACGGGCGGGAAAAAGTACAAGGACGTAGCTGATGCAGCACAGGCAGCATTCGAGTCAGCAGCATATGCTGCAGCTGCTGCAAGAGCGGCACTGGAACTCTCCCGATCTGAGTCACATGATCCTAGTGATCATGATAGTCCAGGCCCTCAACCAAGAAAAGTGGAGGATGGACATGATAATGTGAAACCTCAAATTGAAAAGGAAATCCTCAGTGAAAATCAACAAGAAGATTTTAACAAGGATATGGATGAGTTAAAAAGGTCAAAAGACGTCATATGTAGAAATTCAACTGATAAGGTTTTGATGGGGGTTAATGCCTCAGTGGATGCTGAAATTGAGGCTGATCCTTTGGAAGAGGAAGTAGTTTATGATGATAGTGGTGATGAAACTGATAACAATCAGAATAAAAATGAATCCTCCAAGAAGACATCATCAGGTTATGGAACTGGTAAAGTTGTCAATTTAGGTTCCAGGAAACTAGTATTAAATACCGTGTCAGAATCCAAGATGCAAGGTGTGCCTCAGTTGGATTTGCAAAAGAGGCCAATTTCAGTGAGGACTAGATGA 1257 0.4368 MGKKLDALLGRTFKAAKFKAIVNLAISRLAVLKNQRQARLRNARSDVLELLQQGHLERASLRVEHVIKDQNMLDVYDRIAGYCNLLIERSHLIEQERECPEELKEAASGLLYAASRCGEFPEIQEIRAVLTSRFGKEFAGRSIELRNNCGVHPQMIQKLSTRMPRLESRIKVLKDIASQNGIVLQLEETTVSVEEQSEVEMQNLHEPEKKEENISILPSGGTNEELTNSFTGGKKYKDVADAAQAAFESAAYAAAAARAALELSRSESHDPSDHDSPGPQPRKVEDGHDNVKPQIEKEILSENQQEDFNKDMDELKRSKDVICRNSTDKVLMGVNASVDAEIEADPLEEEVVYDDSGDETDNNQNKNESSKKTSSGYGTGKVVNLGSRKLVLNTVSESKMQGVPQLDLQKRPISVRTR 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01600 418 MobiDBLite consensus disorder prediction 201 229 - -
Phco4g01600 418 Pfam Regulator of Vps4 activity in the MVB pathway 19 182 IPR005061 GO:0015031
Phco4g01600 418 Gene3D - 6 194 IPR042277 -
Phco4g01600 418 MobiDBLite consensus disorder prediction 367 381 - -
Phco4g01600 418 PANTHER IST1 FAMILY MEMBER 15 360 IPR005061 GO:0015031
Phco4g01600 418 MobiDBLite consensus disorder prediction 340 381 - -
Phco4g01600 418 MobiDBLite consensus disorder prediction 263 288 - -
Phco4g01600 418 FunFam Vacuolar protein sorting-associated protein IST1 9 192 - -
Phco4g01600 418 MobiDBLite consensus disorder prediction 342 357 - -
Phco4g01600 418 MobiDBLite consensus disorder prediction 398 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01600 Phco-Chr4 15298731 15300520 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g01600 4 15298731 15300520 Phco4g01600 4 15298731 15300520 ECH