Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g02971 ATGGGTTCAGTTTGTTGCTGTTTTAATGTTGATGATTTTGAAGATTATATGAATCCAAATAGTCCTGTATATAGGAACTGCATGTGTCTCAGTTGCTTCCTACAGAACTTTTTGACTGTGTATGCATCAATATTCCGTAGAGGGGAAGCGCATACGATTCCTTCATCTATACAGGGCACAGCATCTATGACTTCTACAGCTTCACTTGATAATTCTTTATCTGACATGTACCGCTCTCCTCCAAGGCCCTTGCCTTATGATTCAGACCCCAGGTTTTTCCGTTCACAGCGTGATGGACTAGTGTCAAGACGTGAGAAGGGTTCAAGTCATTTGAATGAAGAGTCAGAACCTCTAAGAGGTGATGTAGATGCTGATTCAGAATCTTTAAATTTGGGTGGTAAATGGAATGATACCAGTGAAGATGGATCAAAGGAATACCGTAAGTCCTCTGTGAGAATTTCATCAGCAAAACTTACGACTGGACCTGGGGTTGTCTATTCGTCATCAGAAGTGGAGGATGTCTGTCCAACATGTCTTGAAGAATACACTGAAGAGAATCCAAAGATAGTGACAAAATGCTCTCATCATTTTCATCTTGGTTGCATTTATGAGTGGATGGAAAGAAGTGACAACTGTCCTGTTTGTGGGAAGGAGATGGTATTCGATGAAACGACTTAA 678 0.4086 MGSVCCCFNVDDFEDYMNPNSPVYRNCMCLSCFLQNFLTVYASIFRRGEAHTIPSSIQGTASMTSTASLDNSLSDMYRSPPRPLPYDSDPRFFRSQRDGLVSRREKGSSHLNEESEPLRGDVDADSESLNLGGKWNDTSEDGSKEYRKSSVRISSAKLTTGPGVVYSSSEVEDVCPTCLEEYTEENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKEMVFDETT 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g02971 225 MobiDBLite consensus disorder prediction 91 123 - -
Phco3g02971 225 Pfam RING-H2 zinc finger domain 169 215 IPR024766 GO:0008270
Phco3g02971 225 ProSiteProfiles Zinc finger RING-type profile. 175 215 IPR001841 -
Phco3g02971 225 CDD RING-H2_AIRP1-like 172 219 - -
Phco3g02971 225 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 154 223 IPR013083 -
Phco3g02971 225 MobiDBLite consensus disorder prediction 72 147 - -
Phco3g02971 225 FunFam E3 ubiquitin-protein ligase At3g02290-like 152 222 - -
Phco3g02971 225 SUPERFAMILY RING/U-box 171 222 - -
Phco3g02971 225 SMART ring_2 175 215 IPR001841 -
Phco3g02971 225 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 55 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g02971 Phco-Chr3 56057183 56061930 Dispersed/Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g02971 3 56057183 56061930 Phco3g02971 3 56057183 56061930 ECH