Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g02958 ATGATCAGGCTGTTGCTATCTTCAAGTCTCTTCTTGAAGGCACCAATGGCTTTGTTCATGGCAATTCTAGGCGTTGTTGTGTTGGTGCTCTGTTTTTGCTCTGCTCTCTTGAAGTGGAATGAAGTGAGATTCAGGAGGAAAGGCTTGCCTCCTGGCGCAATGGGTTGGCCAGTTTTTGGGGAGACAACCGAGTTTCTTAAGCAAGGTCCAAACTTCATGAAGAACAAGAGGGCAAGGTATGGCAGTTTTTTCAAATCTCACATTCTGGGGTGTCCTACCATTGTATCCATGGATCCGGAGCTGAATAGATTCATACTGATGAATGAAGCAAAAGGGCTTGTTCCGGGGTACCCACAATCCATGTTAGATATCTTAGGCACACGCAATATTGCAGCTGTTCATGGCTCCACTCACAAGTACATGAGAGGGGCACTGCTTTCAATTATTAGCCCCACCTTGATCAGGGATCAGCTTTTACCAAAAATTGATGAGTTCATGAGAACCCACTTGATTGATTGGGATAACAAAGTCATAAACATCCAGGAGAAAACTAAAGAGATGGCTTTTCTCTCTTCCCTGAAGCAGATTGCTGGTATGGAATCCAGCTCAATAGCTCAACCCTTCATGACGGAGTTCTTTAAACTAGTTTTGGGAACACTCTCTTTGCCTATTAACCTCCCTCGCACAAATTATCGCGGTGGATTGCAGGCAAGGAAAAGTATCATCAGCATTCTGAGTCAGTTACTAGAGGAAAGGAAAGCATCCCAAGATGCCCACGTGGACATGCTGGGTTGCTTGATGAAAAAAGATGAAAACCGATACAAACTAACTGACGAGGAAATAATTGATCTAGTTATTACAATTATGTATTCTGGTTATGAAACTGTTTCAACTACATCAATGATGGCAGTGAAGTATCTCCATGACCATCCCAAAGTTCTTGAGGAAATCAGAAAAGAGCACTTTGCCATAAGGGAAAGGAAAAAGCCAGAGGATCCAATTGACTGTTATGATCTCAAGTCAATGAGGTTTACTCGTGCGGTGATTTTTGAGACCTCGAGATTAGCTACAATAGTTAATGGGGTTCTAAGAAAGACAACTCACGACATGGAACTAAACGGGTATCTGATTCCTAAAGGGTGGAGGATATATGTATATACGAGAGAGATCAATTATGATCCATTTCTGTATCATGATCCACTAACATTCAACCCATGGAGATGGCTGGGTAACAGTCTGGAGTCACAAAGCCACTTCTTGATTTTTGGAGGGGGCACCAGACAATGTCCAGGGAAGGAGCTGGGGATAGCAGAAATTTCCACGTTCTTGCACTACTTTGTAACTAGATACAGATGGGAAGAAGTAGGAGGAGATAAACTAATGAAGTTTCCTAGAGTTGTGGCACCAAATGGACTGCACATAAGGGTCTCATCTTTTACTAACTAG 1446 0.4274 MIRLLLSSSLFLKAPMALFMAILGVVVLVLCFCSALLKWNEVRFRRKGLPPGAMGWPVFGETTEFLKQGPNFMKNKRARYGSFFKSHILGCPTIVSMDPELNRFILMNEAKGLVPGYPQSMLDILGTRNIAAVHGSTHKYMRGALLSIISPTLIRDQLLPKIDEFMRTHLIDWDNKVINIQEKTKEMAFLSSLKQIAGMESSSIAQPFMTEFFKLVLGTLSLPINLPRTNYRGGLQARKSIISILSQLLEERKASQDAHVDMLGCLMKKDENRYKLTDEEIIDLVITIMYSGYETVSTTSMMAVKYLHDHPKVLEEIRKEHFAIRERKKPEDPIDCYDLKSMRFTRAVIFETSRLATIVNGVLRKTTHDMELNGYLIPKGWRIYVYTREINYDPFLYHDPLTFNPWRWLGNSLESQSHFLIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWEEVGGDKLMKFPRVVAPNGLHIRVSSFTN 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g02958 481 FunFam Cytochrome P450 85A1 40 478 - -
Phco3g02958 481 PRINTS E-class P450 group I signature 346 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco3g02958 481 PRINTS E-class P450 group I signature 300 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco3g02958 481 PRINTS E-class P450 group I signature 419 429 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco3g02958 481 PRINTS E-class P450 group I signature 386 410 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco3g02958 481 PRINTS E-class P450 group I signature 77 96 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco3g02958 481 PRINTS E-class P450 group I signature 429 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco3g02958 481 PRINTS E-class P450 group I signature 280 297 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco3g02958 481 PRINTS P450 superfamily signature 347 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco3g02958 481 PRINTS P450 superfamily signature 420 429 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco3g02958 481 PRINTS P450 superfamily signature 291 308 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco3g02958 481 PRINTS P450 superfamily signature 429 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco3g02958 481 Pfam Cytochrome P450 50 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco3g02958 481 SUPERFAMILY Cytochrome P450 43 476 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco3g02958 481 PANTHER CYTOCHROME P450 26 47 457 - -
Phco3g02958 481 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 422 431 IPR017972 GO:0005506|GO:0016705
Phco3g02958 481 Gene3D Cytochrome P450 40 478 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco3g02958 481 CDD CYP90-like 77 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g02958 Phco-Chr3 55942465 55946885 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g02958 3 55942465 55946885 Phco3g02958 3 55942465 55946885 ECH
Phco5g01544 5 51314597 51319195 Phco3g02958 3 55942465 55946885 PCT