Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00585 ATGGGATTTTGTTTTACCCCTTCACTATCAATGGTTGTGGCCAATGTGTATGACCTACCAGCCATTTTCATGGATGGTGGTGGGGACCACTTGCGCGTGTGTCACACAAGTCACGAGAAAAACAAAGGTTTGAAAGTGGAAACATCTATGGCTACCAACAAGTTTGCAACCATGCTGCATAGAAACACCAACAAGATGGTGGTGATTCTAGTTTATGCTGTGCTTGAATGGGTCTTGATTGCACTCCTTCTTCTTAACTCTTTGTTCAGTTATCTCATCACGAAGTTTGCCAAATGGGTTGGCCTTCAACCACCGTGTGTTTGGTGTTCAAGGGTTGATCACGTGCTGCAGCAAGAAAATGACGCGCGTGTGCACAAGGATCTCGTGTGTGAGGCTCATGCAGCTGAGATTTCCAAGCTTGGTTACTGCTCAAATCATCAAAGACTGGCGGAAACGCACACCATGTGTGAGGATTGTTTGGCCTCTCGGCCAAACCATCATGAAAATTCCTTTGGAATGAGGCACAGGATCGCTTTCATTTCGTGGGTGAGTAGTCATGGCAAACATGAAAGTGGAGATAGCTTGATAAGAAGGTGCTCTTGCTGCAATGAGAGCTTGAGCAGCCAGCTTTACCCTCCTTATTTGCTATTGAAGCCTTCATGGCGCGACGAGAATTACACGAGCAAAGGGTCCCTGATTGTGGAAGAGGCAATAGATGATGAAAAAAGTGATAAAGACCTCGAGTTTGAGAGCAACAACGAGGAAGGTCATGATGATGAAGGGGTGGCAGATGAGCATCAGATACTTTCTGATATTGAGAGTTTTATCCTCAGAGAGGTTGCTGAGGATCGTTCAAGTGTTTCAAACTTGCACTCAGATGAAAAGGATGGGGGAAAAGATGAGAAGGAAGATGATCTTACCATTACTGAGCTGGATCCAAGTGGTGATGACAATTTTGCTTGTCAATTCACTTCCACTATGCAGGGTTTACTCTGGGAAGATAGATCGCTTGAAGTCATCAATCTGCATTTTGAGAATTGTATGGCTTGTGATAGCTGCCGCTTGGTGCCTGTCAAGTTAATAGACTATGTTACCTCTTTGAATTTTGAAACATGCAAATTGGATGAGGATTTGGGGGATAGGGAACAAAAGACTCAGACTCAGACCTTTGTTCACGAGTCACCAATTGAAGCACAATCAAGTATCTTAGAAAGGGGAGGATTACTCACATTGGATGAGAATGCAGAGAAAAAAATTATGAGATCAGTTGAAAGCTCGGAAAATTCTATAAATTTGGAATTTGAAGGGTTGAAACCGAATTCAGAGATTACCACTAGGGAAGTTCAGACTTCGCTGAATGATGACAACAGTGTTGAAGCGGCTACTGAAGAACTAGATGATACACAAGTCGATCTGCCTCGATCTCAAGAACCAGTCTGCTCTAGTGACTGCACACAAGAAGATGAATCTTCGTCAAGTGAAGATGATGCTGAAGTTCAAAATGCCTTTGATGAATTCATTTCTCAGAATCATCTTAGTGAGACTCAAAGTTTATCTAATGATGACAACAGTGTGGAAGCAGCTATGCAAGGACCAGAAAGTCCACCAGGAGTTAATCTGCCTCCGTCTCAAGAACCAGCCTGCTCTGTTCAATGCATATCAGAAGACGAATCTTCTTCATCAAGTGATGATGATGCTGAAGTTCAAAACGCCTTTGATGCATTTATTGCTCAGAATCATCTAGTCCAGTCTCAAAGTTTATCCAATGATTATAAAAGCATAGAAGCAGATATGGAAGAACCAGAAAATACACGAGCTGATCATCCTCCATCTGAAGAACCAGCTAGCTCATCTCAAAGCATACCAGAAGATCAATCTATCACAAGTGAGGATGACACTGAAGCTCCAAATGCCTTTGATGATTTCATTGCCCAGAATAATGTCTGTCCAGATAAAAAGCGTGTAAAAGATAACGAGTATGCTAAGATGATTGAGAAAACAGCAGCAGTTGAGAAAAATCATGAAGAAACAAGCAATGAATCTTCCAAGTGCTCAGAGCCATATGAAGTAGAAGAAGATAAACTTCCTGAGACTCCTAGATCTGTAGATGGCCTGCAGTACCTGCTTAAAAGAGAACCAGTAGCAGATGATTCTATGGATGGTAGCGTTGCAAGTGAGCTAGAATGTGGTGATCCAGTATCAACAATTGATCGGCTAAAAACGGTTATAAAATCTGAAAGAATGGCCCTAACAGCTGTATATCAAGAACTAGAAGAAGAGAGAAGTGCATCAGCAATAGCTGCCAATCAGACAATGGCAATGATTACAAGGCTGCAGGAAGAAAAGGCAGCAATGCAGATGGAAGCATTGCAATACCAGAGGATGATGGAAGAACAATCCGAGTATGATCAAGAAGCTTTACAGCTTTTAAATGAGTTGATGATGAAAAGGGAGAAAGAGAAGCAAGGACTTGAGAAGGAGTTGGAAGAGTACAGACAGAAGGTAATGGAATATGAAGCAAAAGAGAAACTGAGGGTGCTGAGAAGAATGAAAGATGGAAGTGTAAGAAGTAGAGACTCCTCTTCTTCTTGCAGCAATATGAACTACAGTGATGATCTATCCATTGATCTTAACCGCGAGGTGCGCGACGAAGATAATGTTTTATTCAACCATGAGGAAAGCAGCCAGAATAATGCATCTGAAGATACAGTTTCTAATTTGGAGGAGATGGCACTAGACTGTGTAAAGCATGTGAGTGCACTTGATGACACATTGGCAGAGTTTGAGGAAGAGAGGGCTTCCATTCTAGAACAGCTCAAAGCATTAGAGGAAAAAATTATTTCATTGGGAGATAATGATGAACTCCTTGATGATATCAAATTGATTGAGCAATCATCAATGTATGGCGGTGACAAAGACTTGAATGAGAATGGATATTTTAATGGGTTTTCAGATGATAAACACTCTCCAATAAGTTCCTTGGCAAAGAAGCTACTTCCATACTTAGATGCAGCTGAAAATGAGACTGAGGAAGCATACACACTTGAGAGACAATTGGAATCTGAATCATCTGATATGCAGAACTCAGTTACTATACTTGAAATGGATAGCATGAAGACATCCATTGAAGAGGAGGTTGATCTCGTTTATGAGAGGTTACAAGCTCTTGAAACAGATAAGGAGTTTCTACAACACTGCATGGGTTCCATACAAAATGGTGGAGAGAAAGGAGTGGATTTGCTTCAAGAAATCTTACAGCATCTTCGTGATCTTAAGGATGTGGAACTCCGCCTGAAGACTTTGGGAAATGATCCACTATAG 3321 0.4155 MGFCFTPSLSMVVANVYDLPAIFMDGGGDHLRVCHTSHEKNKGLKVETSMATNKFATMLHRNTNKMVVILVYAVLEWVLIALLLLNSLFSYLITKFAKWVGLQPPCVWCSRVDHVLQQENDARVHKDLVCEAHAAEISKLGYCSNHQRLAETHTMCEDCLASRPNHHENSFGMRHRIAFISWVSSHGKHESGDSLIRRCSCCNESLSSQLYPPYLLLKPSWRDENYTSKGSLIVEEAIDDEKSDKDLEFESNNEEGHDDEGVADEHQILSDIESFILREVAEDRSSVSNLHSDEKDGGKDEKEDDLTITELDPSGDDNFACQFTSTMQGLLWEDRSLEVINLHFENCMACDSCRLVPVKLIDYVTSLNFETCKLDEDLGDREQKTQTQTFVHESPIEAQSSILERGGLLTLDENAEKKIMRSVESSENSINLEFEGLKPNSEITTREVQTSLNDDNSVEAATEELDDTQVDLPRSQEPVCSSDCTQEDESSSSEDDAEVQNAFDEFISQNHLSETQSLSNDDNSVEAAMQGPESPPGVNLPPSQEPACSVQCISEDESSSSSDDDAEVQNAFDAFIAQNHLVQSQSLSNDYKSIEADMEEPENTRADHPPSEEPASSSQSIPEDQSITSEDDTEAPNAFDDFIAQNNVCPDKKRVKDNEYAKMIEKTAAVEKNHEETSNESSKCSEPYEVEEDKLPETPRSVDGLQYLLKREPVADDSMDGSVASELECGDPVSTIDRLKTVIKSERMALTAVYQELEEERSASAIAANQTMAMITRLQEEKAAMQMEALQYQRMMEEQSEYDQEALQLLNELMMKREKEKQGLEKELEEYRQKVMEYEAKEKLRVLRRMKDGSVRSRDSSSSCSNMNYSDDLSIDLNREVRDEDNVLFNHEESSQNNASEDTVSNLEEMALDCVKHVSALDDTLAEFEEERASILEQLKALEEKIISLGDNDELLDDIKLIEQSSMYGGDKDLNENGYFNGFSDDKHSPISSLAKKLLPYLDAAENETEEAYTLERQLESESSDMQNSVTILEMDSMKTSIEEEVDLVYERLQALETDKEFLQHCMGSIQNGGEKGVDLLQEILQHLRDLKDVELRLKTLGNDPL 1106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00585 1106 Coils Coil 1002 1022 - -
Phco3g00585 1106 MobiDBLite consensus disorder prediction 576 592 - -
Phco3g00585 1106 MobiDBLite consensus disorder prediction 462 655 - -
Phco3g00585 1106 MobiDBLite consensus disorder prediction 287 309 - -
Phco3g00585 1106 MobiDBLite consensus disorder prediction 667 694 - -
Phco3g00585 1106 Coils Coil 1039 1059 - -
Phco3g00585 1106 Pfam Zein-binding 738 828 IPR007656 -
Phco3g00585 1106 Coils Coil 918 952 - -
Phco3g00585 1106 MobiDBLite consensus disorder prediction 610 626 - -
Phco3g00585 1106 MobiDBLite consensus disorder prediction 503 527 - -
Phco3g00585 1106 Coils Coil 768 841 - -
Phco3g00585 1106 MobiDBLite consensus disorder prediction 287 313 - -
Phco3g00585 1106 MobiDBLite consensus disorder prediction 243 264 - -
Phco3g00585 1106 MobiDBLite consensus disorder prediction 593 609 - -
Phco3g00585 1106 PANTHER MYOSIN-BINDING PROTEIN 2 50 1100 IPR039306 GO:0017022
Phco3g00585 1106 ProSiteProfiles GTD-binding domain profile. 734 832 IPR007656 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g00585 Phco-Chr3 4756547 4762664 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g00585 3 4756547 4762664 Phco3g00585 3 4756547 4762664 ECH