Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02644 ATGGAGAACTTGCTGGGTCTGCTGAGAATTCATGTTGATAGAGGTGTCAATCTTGCTATCAGGGATGTGGTGAGCAGTGATCCCTATGTTGTCATCAAAATGGGCAAGCAGAAGCTGAAGACTCGGGTGGTCAAGAAGAATTTAAATCCTGAATGGAATGATGACTTGACCCTGTCTATTTCAGACCCTCATGCTCCAATCCATCTACAAGTGTATGACAAGGACACATTCAGCCTGGATGACAAAATGGGGGATGCTGACTTTTCCATAGGTCCATTCACTGAAGCAGTGAAGATGCGGTTGGCAGGTCTCCCCAACAATACTATAGTTACAAAAGTGTTACCCAGCAGACAAAACTGCTTAGCTGAAGAGAGTCACATTGTCTGGAAGGATGGCAAAGTTGTGCAAAACATGGTTCTTAGACTAAGAAATGTAGAGTCTGGGGAGGTGGAACTCAAGTTAAATTGGATTGACATTCCTGGTTCAAGGCATCTCTAG 498 0.4418 MENLLGLLRIHVDRGVNLAIRDVVSSDPYVVIKMGKQKLKTRVVKKNLNPEWNDDLTLSISDPHAPIHLQVYDKDTFSLDDKMGDADFSIGPFTEAVKMRLAGLPNNTIVTKVLPSRQNCLAEESHIVWKDGKVVQNMVLRLRNVESGEVELKLNWIDIPGSRHL 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02644 165 CDD C2_ArfGAP 5 148 - -
Phco2g02644 165 ProSiteProfiles C2 domain profile. 1 106 IPR000008 -
Phco2g02644 165 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 91 IPR035892 -
Phco2g02644 165 SMART C2_3c 7 102 IPR000008 -
Phco2g02644 165 Gene3D C2 domain 3 164 IPR035892 -
Phco2g02644 165 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 3 163 IPR044562 -
Phco2g02644 165 Pfam C2 domain 6 92 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02644 Phco-Chr2 56143466 56145321 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02644 2 56143466 56145321 Phco5g00326 5 2760456 2762488 ECH
Phco2g02644 2 56143466 56145321 Phco2g02644 2 56143466 56145321 ECH
Phco4g01838 4 35880202 35890521 Phco2g02644 2 56143466 56145321 ECH
Phco8g03105 8 45499543 45501875 Phco2g02644 2 56143466 56145321 ECH