Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02639 ATGAAGAGGGATTTCCAACAAACCTGCGCCGGAGGATCTGTCAAGGGTGAGTCTTCCTCAATGCCCAACGGGAAGGCCAAGATGTGGGAGGAAGACCGCCACCAGCAGGGAGGAGGGATGGATGAGTTGCTGGCGGCCTTGGGTTACAAGGTGCGCGCTTCCGACATGGCTGACGTCGCACAGAAGCTTGAGCAGCTCGAGATGGTCATGGGGAGTGCCCAGGAAGAGGGAATTTCCCACCTTGCTTCCTACACCGTTCACTACGACCCTACGGATCTCCATTCTTGGGTCCAGAGCATGTTAGCTGAACTCAACCCCGAACCCACCACCATCCTCGATCCCTCCTCCTTCTTGATCGACAACCCCGTCCACTCTTCCCCCATCCTCACCACCACCTCACGCGTTTTCAACGACGACTCCGAATATGACCTCAGAGCCATTCCCGGAATAGCCGCATACCCTCCTCAACAAGCCACAAACAACGGCCCCACCATTAACACTACCACTGCCTCCACCATCACCACCATCACCACCACCACCACTAACACCCAAACCGTGGAAGAAATCGAACCGGGTAGCAACAAGCGCTTGAAGGCTTCCCCAATTGAATCCTCGGAGTCCGCTTCGGAGCCCACCCGCCCGGTAGTCCTCGTTGACTCACAGGAAGCCGGCGTGCGTCTGGTCCACACTCTCTTGGCGTGCGCTGAGGCCGTCCAACAGGAGAATCTGAAGCTGGCAGACGCGCTGGTAAAGCACGTGGGCGTACTAGCAGCGTCGCAAGCCGGCGCCATGAGGAAAGTGGCGACGTACTTCGCCCAAGCCCTGGCGCGTCGAATCTACGGTATCTTTCCGGAGGAAACCCTGGATTCCTCTTTGTCCGACCTTCTACACATGCACTTCTACGAGTCCTGCCCTTATCTGAAGTTCGCTCACTTCACTGCCAACCAGGCCATTCTTGAGGCCTTCGCCACCGCTGGGAGAGTCCACGTCATCGATTTCGGCCTCAAGCAAGGGATGCAGTGGCCCGCCCTCATGCAGGCCCTCGCATTGCGCCCTGGCGGTCCCCCAACCTTCCGCCTAACCGGAATTGGGCCCCCGCAGCCCGACAACACTGACGCCCTGCAACAAGTGGGCTGGAAGCTTGCCCAGTTAGCCCAAACCATTGGCGTCCAGTTCGAATTCCGCGGATTCGTCTGCAGCAGCCTCGCAGATCTCGACCCGAACATGCTCGAGATCCGTCCCGGAGAAGCCGTAGCTGTCAACTCCGTCTTCGAGCTCCACCGCATGCTCGCTCGACCCGGATCCGTCGACAAGGTCATGGGCACAGTTAAAAACCTCAACCCCAAAATTGTAACCATCGTGGAGCAAGAGGCGAACCACAACGGACCGGTTTTCTTGGACCGGTTCACTGAAGCTTTGCATTACTACTCGAGTCTGTTTGACTCGCTGGAGGGTTCTTCCTCCTCCACCGGGTTAGGTTCGCCGAATCAGGATCTGTTGATGTCGGAGTTGTACCTTGGGAAACAGATATGCAACGTGGTGGCGTACGAAGGCGTGGAACGCGTGGAGCGTCACGAGACTTTGAGCCAGTGGAGGGGGCGAATGGGCTCGGCAGGGTTCGACCCGGTTCATCTCGGGTCAAACGCATTCAAGCAAGCTAGTATGTTGCTGGCGCTATTCGCCGGCGGTGACGGGTACAGAGTGGAGGAGAACAACGGGTGCCTCATGCTTGGGTGGCACACTAGGCCTCTCATCGCCACCTCTGCGTGGAAGCTTCCCTCGCCCGAGTCCTAG 1794 0.5819 MKRDFQQTCAGGSVKGESSSMPNGKAKMWEEDRHQQGGGMDELLAALGYKVRASDMADVAQKLEQLEMVMGSAQEEGISHLASYTVHYDPTDLHSWVQSMLAELNPEPTTILDPSSFLIDNPVHSSPILTTTSRVFNDDSEYDLRAIPGIAAYPPQQATNNGPTINTTTASTITTITTTTTNTQTVEEIEPGSNKRLKASPIESSESASEPTRPVVLVDSQEAGVRLVHTLLACAEAVQQENLKLADALVKHVGVLAASQAGAMRKVATYFAQALARRIYGIFPEETLDSSLSDLLHMHFYESCPYLKFAHFTANQAILEAFATAGRVHVIDFGLKQGMQWPALMQALALRPGGPPTFRLTGIGPPQPDNTDALQQVGWKLAQLAQTIGVQFEFRGFVCSSLADLDPNMLEIRPGEAVAVNSVFELHRMLARPGSVDKVMGTVKNLNPKIVTIVEQEANHNGPVFLDRFTEALHYYSSLFDSLEGSSSSTGLGSPNQDLLMSELYLGKQICNVVAYEGVERVERHETLSQWRGRMGSAGFDPVHLGSNAFKQASMLLALFAGGDGYRVEENNGCLMLGWHTRPLIATSAWKLPSPES 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02639 597 MobiDBLite consensus disorder prediction 188 213 - -
Phco2g02639 597 FunFam DELLA protein GAI 39 104 - -
Phco2g02639 597 SMART DELLA_2 41 114 - -
Phco2g02639 597 Gene3D - 39 104 IPR038088 -
Phco2g02639 597 Pfam Transcriptional regulator DELLA protein N terminal 41 108 IPR021914 -
Phco2g02639 597 Pfam GRAS domain family 227 591 IPR005202 -
Phco2g02639 597 MobiDBLite consensus disorder prediction 1 25 - -
Phco2g02639 597 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 187 587 IPR005202 -
Phco2g02639 597 ProSiteProfiles GRAS family profile. 218 591 IPR005202 -
Phco2g02639 597 Coils Coil 56 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02639 Phco-Chr2 56112708 56114501 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Phco2g02639 GRAS 9e-138 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02639 2 56112708 56114501 Phco2g02639 2 56112708 56114501 ECH
Phco2g02639 2 56112708 56114501 Phco9g00714 9 5273378 5276200 ECH
Phco2g02639 2 56112708 56114501 Phco3g00587 3 4774565 4776172 PCT