Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00331 ATGTTGTGTGCTTGTTCCGGAGAGCAATTCAAATTTGAAGAGGCACCACAGTCACCTGAGTCCTTGGCAACAAGGGATTTCTCTGCAAGTGGTCTTTCTTCAAGGACTGGGGATTGGGAATCCAAATTTGATGAGACGCAAGTGGAAGAAGTTGAATCTACTTTAAAAGAAACTCTCTCATTAAACTATGAGGAAGCTCGGGCTTTGCTGGGGAGGCTTGAATTCCAAAGAGGGAACTTTGATGCTGCCCTTCTAGTTTTTGAAGGTATAGACATAAGGGCTTTGGCCCCAAGGATGATCAGGGCTATAGCTGAAAGAACCAAGCAACGAAAACCGCGGTCAAAGGTGGATAATGTGCTTCCTAATGTAATGTCAATGCATTCAGTAAGCCTGCTTCTAGAGGCAATTTTGCTTAAATCCAAATCCTTAGAAGAACTTGGAAGATACACCGAGGCTGCAAAAGAGTGCAGAATTATTGTAGATACAGTTGAATCTGCTCTCCTTAAAGGAATGCCTGAGGGTATTGGTGAAGATTGTAAGTTGCAAGAAATGTTCTACAAAGCATTGGAGTTGCTTCCAAATCTATGGATCAAGGCAGGTTTTCTAGACGAAGCTGTCACTGCTTATCGGCGGGCTCTAATCAAGCCGTGGAATTTGGAGCCGTGGAGATTGGCCCGTGTACAAAAAGATTTGGCTACCACACTACTCTATGGTGGCGTTGAAGTAAACCTACCCTCTCAGTTGCAAGTGAATGGTCTAACTACACCTATGAGTGGCACTGAAGAAGCCATACTTCTGCTGTTAATACTCTCAGGAAAGATGGCACTTCAGGAAATAGACTGGGACCCTGAAATAATGGATCATCTTACATTTTCACTTTCAATTACTGGAATGTTTGAATCATTGGCAGATAACTTAGAGAAGACCCTTCCAGGTCTTTATGATAGGGCAGAGAGGTGGTATTTTCTTGCTCTTTGTTACAGTGCAGCGGGACAGAATGAAGTAGCCTTGAACCTTTTGAGGAAAGCTTGTGGCAGTTCTGAAGCCAAGCACAGACCCTATTTTCCTTCATTTTTGTTTGGTGCAAAGCTATGTTCTCTATGTCCAAACCATGCTCATGAAGGCATTAAGTTTTCAGAGGAAGTTATTGATCTAGCCAAGCATCAAAATGAGCATTTTCTGGGAGAGGGCCAAAAATTTCTGGGCACTTGCCAAGGGGCTGCTGCTAGAATATCTGTTCTAGATTCCGAAAGAATTATATTTCAAAGACAGTCTTTGTACTTTCTAAACGATGCTGTTGCTCAAAATGGAAATAATGATCCAGAAGTGATGTTCAACCTTGGATTGGAAAATGCAATCCAAAGAAATCTAAATGCAGCATATGACAATCTAATGATATACTCTGACATGATGGCTGGCAGCTCAAAAAGAGGTTGGCAGTTGTTAGCACTCATAGTATCAGCACAACAGCGGTTTAAGGATGCGGAAACTATAGTTGATTTTGCTTTAGATGAGGCTTGTAGTATAGACCAATTAGAACTACTGAGACTGAAAGCTATACTTCAAATTACTCAGCAGCAACCCAAGCAAGCAATAGAGACCTACAGAATCTTGCTAGCACTAATTGAATCACAAAAGGAGCATTGGCTTCAGGCTAAGGCATTCAGGCATGAGGCATTAACACAACAGAAATTGGAAATGGAAGCCTGGCAAGATTTGGCTACCATTTATGTAGATCTTTGCTCCTTTCTAGATGCAAAAACTTGTGTTGACAAGGCCCAGTTGATAGATTTTTTTTCTCCTAGAAGTTGGCATATTACTGGGTTGTTGTTTGAATCTCGAACATTGCATAAGGAGGCCTTAGCTTCCTTCTCAGTCTCATTGTCAATAGAACCGGATTACATTCCCAGTATCATTTCTGCTGCAAAATTGTTGCTTAAACTTGGCATGCAACCACTCCCAATCGCAAGAAGCTTTTTAATGAATGCTTTGAGATTAGATCCTACAAACCATGATGCATGGTTTAACCTTGGACTAGTTTCAAAAATGGAAGGTTCATTACAACAAGCAGCAGATTGCTTTCAAGCAGCATATGAGCTGGAGCTTTCAGCTCCAGTGCAAAAATTTGATTGA 2133 0.4144 MLCACSGEQFKFEEAPQSPESLATRDFSASGLSSRTGDWESKFDETQVEEVESTLKETLSLNYEEARALLGRLEFQRGNFDAALLVFEGIDIRALAPRMIRAIAERTKQRKPRSKVDNVLPNVMSMHSVSLLLEAILLKSKSLEELGRYTEAAKECRIIVDTVESALLKGMPEGIGEDCKLQEMFYKALELLPNLWIKAGFLDEAVTAYRRALIKPWNLEPWRLARVQKDLATTLLYGGVEVNLPSQLQVNGLTTPMSGTEEAILLLLILSGKMALQEIDWDPEIMDHLTFSLSITGMFESLADNLEKTLPGLYDRAERWYFLALCYSAAGQNEVALNLLRKACGSSEAKHRPYFPSFLFGAKLCSLCPNHAHEGIKFSEEVIDLAKHQNEHFLGEGQKFLGTCQGAAARISVLDSERIIFQRQSLYFLNDAVAQNGNNDPEVMFNLGLENAIQRNLNAAYDNLMIYSDMMAGSSKRGWQLLALIVSAQQRFKDAETIVDFALDEACSIDQLELLRLKAILQITQQQPKQAIETYRILLALIESQKEHWLQAKAFRHEALTQQKLEMEAWQDLATIYVDLCSFLDAKTCVDKAQLIDFFSPRSWHITGLLFESRTLHKEALASFSVSLSIEPDYIPSIISAAKLLLKLGMQPLPIARSFLMNALRLDPTNHDAWFNLGLVSKMEGSLQQAADCFQAAYELELSAPVQKFD 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00331 710 PANTHER PROTEIN NPG1 1 709 IPR043376 -
Phco2g00331 710 SUPERFAMILY TPR-like 511 700 IPR011990 GO:0005515
Phco2g00331 710 SMART tpr_5 671 704 IPR019734 GO:0005515
Phco2g00331 710 SMART tpr_5 317 350 IPR019734 GO:0005515
Phco2g00331 710 SMART tpr_5 512 545 IPR019734 GO:0005515
Phco2g00331 710 SMART tpr_5 567 600 IPR019734 GO:0005515
Phco2g00331 710 SMART tpr_5 601 634 IPR019734 GO:0005515
Phco2g00331 710 MobiDBLite consensus disorder prediction 21 37 - -
Phco2g00331 710 Gene3D Tetratricopeptide repeat domain 422 706 IPR011990 GO:0005515
Phco2g00331 710 Gene3D Tetratricopeptide repeat domain 34 348 IPR011990 GO:0005515
Phco2g00331 710 ProSiteProfiles TPR repeat profile. 671 704 IPR019734 GO:0005515
Phco2g00331 710 MobiDBLite consensus disorder prediction 15 38 - -
Phco2g00331 710 SUPERFAMILY TPR-like 65 346 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00331 Phco-Chr2 2759286 2762275 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00331 2 2759286 2762275 Phco2g00331 2 2759286 2762275 ECH
Phco2g00331 2 2759286 2762275 Phco7g00525 7 3875954 3879242 PCT