Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00327 ATGGGAACCGAGAGCTACACTTACCTAGGACGCAATTTCAGCCAACTCAGTATCAACGACGCTTCCTCTTCCTCCGCCTTCAGCGACTGCAACAGTGACAGATCTGGCGAATTCGCCACCGCTTCTTCGCAAACGCGCCGTTTCCTCATCACCTGCGCCACCGAAAACTCCGACGACTTGATCCGTCAACTCGTCGCCGATCTCCACTCCGCCTCACTCGACGATCAGAAACAAGCCGCCATGGAAATCAGATTGCTCGCCAAGAACAAGCCCGAGAATCGACTCAAAATCGCCAAAGCCGGCGCAATCAAACCGCTGATTTCACTCATTTCCTCGCCGGACCTCCAGCTCCAGGAATACGGCGTCACCGCGATTTTGAATCTCTCGCTCTGCGACGAGAACAAGGAGGCCATCGCCTCCTCCGGTGCGATTAAGCCGCTGGTTCGCGCGCTGAGCACGGGAACCGCGACGGCGAAGGAGAACGCGGCGTGCGCGCTGCTACGGCTGTCGCAGGTGGAGGAGAACAAGGCGGCGATTGGTCGTTCCGGCGCGATTCCGGCGCTGGTGAGCCTTCTGGAGAGCGGCGGGTTCCGCGCGAAGAAGGACGCGTCGACGGCGCTGTACTCGCTGTGCACGGTGAAGGAGAACAAGCTCAGGGCGGTGAAGGCGGGGATCATGAAGGTGCTGGTGGAGCTGATGGCGGACTTCGAGTCGAACATGGTGGACAAGTCCGCGTACGTGGTCAGCGTGCTGGTGACGGTGCCGGAAGCGAGGGTGGCGCTGGTGGAGGAAGGCGGCGTGCCGGTGCTGGTTGAGATCGTTGAGGTCGGAACACAGAGGCAGAAGGAAATCGCGGTTGTTATTATGTTGCAGGTGTGCGAAGATAGCGTGACGTATCGCTCTATGGTGTCTCGCGAAGGTGCGATTCCTCCTTTGGTGGCTTTGTCTCAGTCCGGCACCAATCGCGCCAAGCAAAAGGCGGAGAAATTAATTGAACTTCTGCGGCAACCAAGATCCAGCAACGGCGGTGGTCGTGCGTCAGAAGTGGCGGTGTAA 1056 0.59 MGTESYTYLGRNFSQLSINDASSSSAFSDCNSDRSGEFATASSQTRRFLITCATENSDDLIRQLVADLHSASLDDQKQAAMEIRLLAKNKPENRLKIAKAGAIKPLISLISSPDLQLQEYGVTAILNLSLCDENKEAIASSGAIKPLVRALSTGTATAKENAACALLRLSQVEENKAAIGRSGAIPALVSLLESGGFRAKKDASTALYSLCTVKENKLRAVKAGIMKVLVELMADFESNMVDKSAYVVSVLVTVPEARVALVEEGGVPVLVEIVEVGTQRQKEIAVVIMLQVCEDSVTYRSMVSREGAIPPLVALSQSGTNRAKQKAEKLIELLRQPRSSNGGGRASEVAV 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00327 351 SUPERFAMILY ARM repeat 58 331 IPR016024 -
Phco2g00327 351 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 142 184 IPR000225 GO:0005515
Phco2g00327 351 FunFam RING-type E3 ubiquitin transferase 50 340 - -
Phco2g00327 351 Gene3D - 54 177 IPR011989 -
Phco2g00327 351 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 101 143 IPR000225 GO:0005515
Phco2g00327 351 Pfam Armadillo/beta-catenin-like repeat 132 170 IPR000225 GO:0005515
Phco2g00327 351 Pfam Armadillo/beta-catenin-like repeat 174 211 IPR000225 GO:0005515
Phco2g00327 351 Pfam Armadillo/beta-catenin-like repeat 91 129 IPR000225 GO:0005515
Phco2g00327 351 Gene3D - 178 338 IPR011989 -
Phco2g00327 351 SMART arm_5 90 130 IPR000225 GO:0005515
Phco2g00327 351 SMART arm_5 213 253 IPR000225 GO:0005515
Phco2g00327 351 SMART arm_5 131 171 IPR000225 GO:0005515
Phco2g00327 351 SMART arm_5 172 212 IPR000225 GO:0005515
Phco2g00327 351 SMART arm_5 254 294 IPR000225 GO:0005515
Phco2g00327 351 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 183 225 IPR000225 GO:0005515
Phco2g00327 351 PANTHER U BOX DOMAIN-CONTAINING 60 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00327 Phco-Chr2 2703362 2704866 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00327 2 2703362 2704866 Phco7g00519 7 3808544 3809883 PCT