Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00325 ATGAAGAAGAACACACAAATCATCATGAAGAATTTCTCTGCCACTCCAAGGTCATCATCAGCACCTTCAATGGATCCCAAAATTTGGAGCAAATTGCCACCTGAAATCCTTGAATACATCCTCTCTTTCCTTCCTCTCAAAACCTTCTTGAATCTCAGATCCACTTGCAAAGGGTTTTGGTCTCTCATATTCTCTCCCTCCTTCATTTCCAAACACTCTTCTCCCTCTTCCTCTTCTTCTTCTTCACCCTTCTCTTCCTTTCTCTTACTCTCACACCCGCAATTCCACCGCCACTTCCCTCTCTACGATTGCACACTTGGCACGTGGCGCAACATCTCTCTCTCGCTCTCTGATTCTTCACTGCACTCTTGCCCTTCCCTCACCACTCTTGTATCCTCTGGTGGCCTCTTCTGCCTATCTGATTCACTATCATGCTCCTTGCTAGTGTGCAACCTTCTGGCCAAGTCTTCTAGAACGATTCAGTACCCAAGTTTCTCTCTTCACTTGGAGCATCTCACTTTTGTCACAACCCCAACAGGGTACACCATATTTGTTCTCTGCTCTCAGGCTGCTTCAAACTCTGCCTTTGTTTATGACTCAAATGTTCGAACTTGGAATCGGTTTCACGGTTTTGGTCCGGTTCTCGGTGACAATCATCATCAACAAGGTGTTTTTTTCAAAGGGGGTTTATATTTTGCAACCCCGGAACCGTTTTCTGTGGTGATATTTGATTTGGGGAGTGGAAAGTGGGAGAAACCCGTTGGAGGGTTACCGAGTCAGCTCACTTTTGTTCGATTGGTGAGTGATGGAGAAGGTAAATTGTATATGGTTGGTGGGGTTGGGAACAATGGAATCTCGAGGAGCATAAAGTTGTGGGAACTGGGTGGAGATGGGAACTGGGTGGAAGTGCAAAGTTTGCCTGATCTTATGTGTAAGAAGTTTGTGTGTGTGTGTTACCATAACTATGAGCATGTTTATTGCTTTTGGCATGAAGGGATGATCTGCATTTGCTGCTACACTTGGCCAGAGATCTTGTATTACTTAGTTTCTCGGAGGACTTGGCATTGGCTTCCCAGGTGCCCTTCTTTGCCTCTTAAATGTAGTTGCGGTTTCAAGTGGTTTTCTTTTCTTCCAAATCTCTATGCTTCAGTCTGA 1155 0.4511 MKKNTQIIMKNFSATPRSSSAPSMDPKIWSKLPPEILEYILSFLPLKTFLNLRSTCKGFWSLIFSPSFISKHSSPSSSSSSSPFSSFLLLSHPQFHRHFPLYDCTLGTWRNISLSLSDSSLHSCPSLTTLVSSGGLFCLSDSLSCSLLVCNLLAKSSRTIQYPSFSLHLEHLTFVTTPTGYTIFVLCSQAASNSAFVYDSNVRTWNRFHGFGPVLGDNHHQQGVFFKGGLYFATPEPFSVVIFDLGSGKWEKPVGGLPSQLTFVRLVSDGEGKLYMVGGVGNNGISRSIKLWELGGDGNWVEVQSLPDLMCKKFVCVCYHNYEHVYCFWHEGMICICCYTWPEILYYLVSRRTWHWLPRCPSLPLKCSCGFKWFSFLPNLYASV 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00325 384 Gene3D - 28 71 - -
Phco2g00325 384 Gene3D - 169 373 IPR015915 GO:0005515
Phco2g00325 384 Pfam F-box domain 29 59 IPR001810 GO:0005515
Phco2g00325 384 SMART fbox_2 32 72 IPR001810 GO:0005515
Phco2g00325 384 CDD F-box_SF 30 63 - -
Phco2g00325 384 ProSiteProfiles F-box domain profile. 26 72 IPR001810 GO:0005515
Phco2g00325 384 SUPERFAMILY F-box domain 21 92 IPR036047 GO:0005515
Phco2g00325 384 PANTHER BNACNNG10540D PROTEIN 6 383 - -
Phco2g00325 384 SUPERFAMILY Galactose oxidase, central domain 80 362 IPR011043 -
Phco2g00325 384 FunFam F-box family protein 91 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00325 Phco-Chr2 2676573 2677727 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00325 2 2676573 2677727 Phco7g00518 7 3798950 3800074 PCT