Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00311 ATGGCGTCGAGTTTTGACCGGTGGGAAAAGGATCCTTTCTTTAACGCCGCCGAAGAAGTTCAAGAGTCTGCAGACAGGATGGAATCTACGTATAGGATATGGATACACGCAACAAAAGATGCGTCCAGCACGTGGAACTCTGATGAAGTGTGTAGAGATCTACATATTGCACTTGGCACTGCCAAATGGCAGTTAGAGGAATTTGAACGGGAAGTGAAGTCAAGTTATGGCAAAATTTCAAGTGATGGAGCGAGAAGTAGGCACCGAGATTTTATCACTGCCATTGAGGATAAGATAATGAAAGTTGAGCATTCGATTAGTGAATCGGTAGGCAAGGCATCTCTGCCTTGGTTGCGTTTAGACGAAGGAGAACAGGATGAACTTGCTTTGTTTCTTTCGGGAAAACCAGAAATTAACAGCAGGGACATTGAAGATCCACCAGTGACTAATTGTTCGAAGGATTTTCATGTTTCACCTGGACGGGGTGAAACAAAGGGGGAGATACCACGTGGGCATCGCAGGGCAGCCAGTGCTAGTGCTGATATTGGTTTTTGGAAAATTTCAGTTCATGATGATGCACAACAGTGGAGTTCCTCTAGTGGTTCTTCTGGTCCAATGCATAATAAAACACCCAGTTTATCAGGAATTCTTAGTTCCATGAAATCAGTCTCTAAGTTGAAGTGGCCTAGGAATGGTTGTAGAAAGCTGAAAGCAGTGGATCATCTTAGAGAAATTGATAGTACACTACTTGCAACAGATGAATTCAGTAGGAGCAACGGTGCAAGCTGGGAAAGCAAGAATGGCCTTGATAGCTGTGATGAATGCTATGACAAGCAACTCTATGGATGGTATGGTGCTATTCGGAGAAAGCTTCAAAGATCTCAATACCAAATGCAATACAGTCAGCCTGTTCGAATAGCTGTTTGGATTTTTTTTCTCCTTTGTTTTATTGCTTTAATTGCATTCCACGCAATGTAG 978 0.4294 MASSFDRWEKDPFFNAAEEVQESADRMESTYRIWIHATKDASSTWNSDEVCRDLHIALGTAKWQLEEFEREVKSSYGKISSDGARSRHRDFITAIEDKIMKVEHSISESVGKASLPWLRLDEGEQDELALFLSGKPEINSRDIEDPPVTNCSKDFHVSPGRGETKGEIPRGHRRAASASADIGFWKISVHDDAQQWSSSSGSSGPMHNKTPSLSGILSSMKSVSKLKWPRNGCRKLKAVDHLREIDSTLLATDEFSRSNGASWESKNGLDSCDECYDKQLYGWYGAIRRKLQRSQYQMQYSQPVRIAVWIFFLLCFIALIAFHAM 325
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00311 325 Pfam Syntaxin 6, N-terminal 11 102 IPR015260 GO:0016020|GO:0048193
Phco2g00311 325 Gene3D - 9 110 - -
Phco2g00311 325 SUPERFAMILY t-snare proteins 10 108 IPR010989 GO:0016020|GO:0016192
Phco2g00311 325 CDD SNARE_NTD_STX6-like 11 106 - -
Phco2g00311 325 MobiDBLite consensus disorder prediction 158 173 - -
Phco2g00311 325 FunFam Syntaxin 10 8 109 - -
Phco2g00311 325 PANTHER OS05G0443700 PROTEIN 1 316 - -
Phco2g00311 325 MobiDBLite consensus disorder prediction 141 173 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Phco2g00311 Phco-Chr2 2551015 2553109 Dispersed/Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00311 2 2551015 2553109 Phco2g00311 2 2551015 2553109 ECH
Phco2g00311 2 2551015 2553109 Phco7g00510 7 3732997 3735288 PCT