Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00308 ATGAGGGAGAGGAAATGTTTAAGAGAAAGCACTGGAAAAGTGATTGGAAGGGTGAAGCGAAGAGCTTTGAGAAGAAGTTGTGGTTTCATTGGTGTCGGAGATGAAGGAAAAGTTTATGTTGTCGCTACCTATGTTAGAGATAGAGTCGAAGTCATGAGAAAAAGGGGGAAAAAACGTTTTCTTTGTCTTTCTCTCTCAATTAAACCTCCAATGGCATCTTCCTCGGAGAACAGAAGCAACACGACGCGTCCCCAGCGCGTGGCGAAGAAGAGAGCCGCAGCTGCCATATGCCAACAGCTCGGAAATGCGAAGAAGAAGCGCGTTGTTTTGGGAGACCTCACGAATGTCTCAAACGCCGTTGCCGTTTCGGATATTCCGAAACGGAAAAGAGTTAAACTCAAGAATATCGATGAAAGAAGCGACCCTCAACTCTGTGGGCCATACGGTTCTGATATATACGAGTACCTTTGCGGATTGGAGGTTGTTCCTAATTTGAGACCGATGCCGGATTATGTTCAGAAGGTTCAGAACGACGTGGATGATAACATGCGCGGTCTTCTGGTGGATTGGTTGGTTGAGGTTGCAGAAGAGTATGAACTGGTTTCAGATACGTTGTACTTTTGTGTGGCTTACATAGATAGGTTTTTATCGTTGAATGTATTGTCCAGAGAGAGATTGCAGTTGCTTGGGGTTGCTGCAATGCTCATTGCTTCGAAATATGAAGAGGTTAAGCCACCCGAGGTGGAGGATTTTTGTTACATTACGGATAATACATACTCTAAGGAAGAGGTTGTGAACATGGAAGCCGATGTATTGATGGCTTTGAAGTTTGAATTGGGTGCTCCTACAGTGAGGACGTTCTTGAGGAGATTCTGTGGAGTTGGTCAAGTGGGTGTTGATACTTCTGATCTCCAGTTTGAGTTCCTTAGCTGCTACCTTGCAGAGCTCAGTTTGTTGGATTATTACTGTGTAAAGTTCTTACCATCTTTGGTGGCAGCATCTGTTATATTCTTAGCAAGATTTATGTTAAGCACAAGGACACATCCTTGGAATTCGGCCCTACACCAACTCACTAAATATAAACCCGCTGACTTGAAGGAATGTATTCTAAACATACATGACTTGTACCTCAGAAGGAGGGGGCCTTCTTTGGAAGCTGTGAGAGAGAAGTACAAACAGCATAAGTTCAAATGTGTGGCAACAACACCATCTCCTCCGGAGATACCCCTTTCTTTTTTTGAATTTTCAAGGGTATCTTAG 1260 0.4389 MRERKCLRESTGKVIGRVKRRALRRSCGFIGVGDEGKVYVVATYVRDRVEVMRKRGKKRFLCLSLSIKPPMASSSENRSNTTRPQRVAKKRAAAAICQQLGNAKKKRVVLGDLTNVSNAVAVSDIPKRKRVKLKNIDERSDPQLCGPYGSDIYEYLCGLEVVPNLRPMPDYVQKVQNDVDDNMRGLLVDWLVEVAEEYELVSDTLYFCVAYIDRFLSLNVLSRERLQLLGVAAMLIASKYEEVKPPEVEDFCYITDNTYSKEEVVNMEADVLMALKFELGAPTVRTFLRRFCGVGQVGVDTSDLQFEFLSCYLAELSLLDYYCVKFLPSLVAASVIFLARFMLSTRTHPWNSALHQLTKYKPADLKECILNIHDLYLRRRGPSLEAVREKYKQHKFKCVATTPSPPEIPLSFFEFSRVS 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00308 419 ProSitePatterns Cyclins signature. 184 215 IPR006671 -
Phco2g00308 419 FunFam Mitotic cyclin 6 167 267 - -
Phco2g00308 419 SUPERFAMILY Cyclin-like 140 279 IPR036915 -
Phco2g00308 419 SMART cyclin_7 189 273 IPR013763 -
Phco2g00308 419 SMART cyclin_7 286 374 IPR013763 -
Phco2g00308 419 SUPERFAMILY Cyclin-like 282 407 IPR036915 -
Phco2g00308 419 Gene3D - 151 401 - -
Phco2g00308 419 FunFam Cyclin A1 269 401 - -
Phco2g00308 419 PANTHER CYCLINS 105 399 IPR039361 -
Phco2g00308 419 CDD CYCLIN_AtCycA-like_rpt2 282 396 - -
Phco2g00308 419 Gene3D - 167 280 - -
Phco2g00308 419 Pfam Cyclin, N-terminal domain 151 279 IPR006671 -
Phco2g00308 419 Pfam Cyclin, C-terminal domain 282 404 IPR004367 -
Phco2g00308 419 SMART Cyclin_C_2 282 405 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00308 Phco-Chr2 2510562 2515329 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00308 2 2510562 2515329 Phco7g00500 7 3668018 3669716 PCT