Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00281 ATGGCTCAACTGATACATGTTGCGGTGGTGGCAGCATCCTTGGGATGTGTTTCAACCCTTTTGCTGGTTTTCATGTGGCGTTTGTGTCATCACAAGAAAGAGCACAGAAACTTTGTTGAAGCCAATAGCTTGACCAGAATGGAGAGTCTCCAAGCAGGAATTGCAAGACTTCATCAACAACAACCTGCAGTCTATCACCAATTTGACCACAAAAACAAAAACAAAAACAAAAGCAAAAACAAAGGCAACTTTTATGTCTTCCATAATGGGGTATCTAGAAGGGGGCATTTGTTCAACTGGGATGATCATCCCTACCTTGTCGTTGATGCCGTGGAAAATGGGTGGTCTGGATTTGCTTTTACTAACTACAAGAGCAGCAACATGCCATCTCATTCAAAGAGATCAAGTCTTTTGGGAGCTTGTGCTGGTGGTGAGTATGGAAGAGAAAGTGAGGCTGAGATAAGTTGGGAAGTGTGTAATGGATCAGCCGAATATATGCAGAAGGTTAGGCTCAATCCTGAGTTGAAAAAGGTTCTTCACTCAAACAACTCTTCCAATATGAGTGTTGCTTCTGTCATTAGGACTGCTCTACCTCTTCCTGGCCCTCCTTTGGGAAACTATGCCTTCCCACAAGAATCTTATTTTGAAATTACCATACTGTGTTCTGGTGTTGCTAATCATGAATCAGTTGTTGGAAAGAAGGAAGGGGAGAAGACAAAACTCCTGATTGAAGATAGTTCCAATGGTATAGGTGATTTGAATATGGTAGAAGAAGTGAAACTTGGGCAGAAAGAGGGTGGTGGAAAGAGCGGATCTGTGATGTTCTCATTGGGGTTAACAGCAGGAGGAGGTGTTCCTTTAAGAGTTCCTGGTAGCTACCCTAGGAGCATTGGATTCAACTCCAATGGTTCTGTATTTCTTGAAGGAATGAAACTTGTGATGGAGTCTGAGAAGGCACAATGGATAGGAACTGAAAGGGTAATTGGATGCGGGTATGATCCAAGGCAGAAAAAGGTTTTCTTCACATTGGACTCAGAATTGGTGCATGTCATCCACTGCCAGTCAGAGGAATTTGGCACTCCACTCTGTCCAACTTTGGCTGCAAATATAGACATTCAGGTTTTAGTTAATTTTGGACAAAGTGCATTCAAATATGCACCTGCAAATGCACAAAGAACACCAAATCCATGCTTCATAGCCCCACTTGTAAATTCCCCTGGTGCTACCCTTGGTTATGATGACAGCAAAGAGCTCTTCTCCATGGGAAGGATTGATTCTCAGTGGCATAATAGATCTGCAAACAAAGCAAATCAACCCAATGGGAATAATAATAGTCAAGTCTTAGATTTTGATGAGTCTGAGGCAGATCTATTTGAAATAGTCTTGGATGGTTCATAA 1398 0.422 MAQLIHVAVVAASLGCVSTLLLVFMWRLCHHKKEHRNFVEANSLTRMESLQAGIARLHQQQPAVYHQFDHKNKNKNKSKNKGNFYVFHNGVSRRGHLFNWDDHPYLVVDAVENGWSGFAFTNYKSSNMPSHSKRSSLLGACAGGEYGRESEAEISWEVCNGSAEYMQKVRLNPELKKVLHSNNSSNMSVASVIRTALPLPGPPLGNYAFPQESYFEITILCSGVANHESVVGKKEGEKTKLLIEDSSNGIGDLNMVEEVKLGQKEGGGKSGSVMFSLGLTAGGGVPLRVPGSYPRSIGFNSNGSVFLEGMKLVMESEKAQWIGTERVIGCGYDPRQKKVFFTLDSELVHVIHCQSEEFGTPLCPTLAANIDIQVLVNFGQSAFKYAPANAQRTPNPCFIAPLVNSPGATLGYDDSKELFSMGRIDSQWHNRSANKANQPNGNNNSQVLDFDESEADLFEIVLDGS 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00281 465 PANTHER IMMUNOGLOBULIN SUPERFAMILY MEMBER 5 72 462 IPR043364 GO:0098609
Phco2g00281 465 SUPERFAMILY Concanavalin A-like lectins/glucanases 288 385 IPR013320 -
Phco2g00281 465 Gene3D - 145 393 IPR043136 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00281 Phco-Chr2 2270743 2272885 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00281 2 2270743 2272885 Phco2g00281 2 2270743 2272885 ECH
Phco2g00281 2 2270743 2272885 Phco7g00479 7 3470718 3472719 PCT