Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00280 ATGAATAATTCGGTCATCCTCCACAACGCAAACGCAATCCACTTCAATTTCCACTCCGCATTATCACAAACACAACGAAGGCACCTTCCTTGGAACAAACACTTAACTCAGCGTTACCCACGCATCCAATGCTGCTGCGTGGAAATCGACATGGTAAAGAACTCCCAAGGCATTTACGCCCCCAAAAGCGACAAGGTCGTCGTTCTCTGGGACCTCGACAACAAGCCCCCTCGCGGCCCCCCATACGACGCCGCCGTTTCGCTCAAAACTCTCGCCTCCCGCTTCGGCGAGGTCACTGACTTCTCCGCCTACGCCAACCGCCACGCCTTCGTCCACCTACCCCAGTGGGTCCTACACGAGCGCCGCGAACGGAGAAGCCTCGACATCCTCGAACGAAAGGGTGTGGTCACACCCTCGGAACCCTACACGTGCGGTGTGTGTGGGCGCAAGTGCAAGACCCACATGGACCTGAAGAAGCACTTCAAGCAGCTGCACCAGCGCGAGCGAGAGAAGAAGCTGAACCGGTTGAAGTCGCTGAAGGGGAAAAAGAAACGGGACCGTTTCAAGGAACGGTTTTTGCGCGGGAATCATAAGTATAATGAGGCGGCGAGGACGCTGCTGGTGCCGAAGGTGGGGTACGGGCTGGCGGCGGAGCTTCGGCGGGCGGGGGTGTTTGTTAAGACGGTGGAGGACAAGCCGCAGGCGGCGGACTGGGCGTTGAAGAGGCAGATGGTGCATTCGATGAGTAGAGGGATTGATTGGCTGTTTTTGGTTTCGGATGATTCGGATTTTTCGGAGATGTTGAGGAGGGCGAGAGAGGCGGATTTGGGGACTGTGGTGGTGGGGGATTGGGATAGGGCTTTGGGGAGGCATGCAGATTTGTGGGTTCCTTGGAGTGCGGTTGAGAATGGGGAAGTAGATTTGGTGCCCAAGAGGAAGAAGAGAAGAGAACATGGTTTTCAAGATATTGATGGCCATGATCGTGATGATTGGGGTGTTTTGAATGAGGATGAGGAATTGGGGCAAGAGTTTATGTTGCATAGTGAGGACGAGGATGAAGATGTGGAGAATTATTATTACGATGATGATGAAGAAGAGGAAGAGGAAGATGGGTTGTATATTTTTTGA 1128 0.5372 MNNSVILHNANAIHFNFHSALSQTQRRHLPWNKHLTQRYPRIQCCCVEIDMVKNSQGIYAPKSDKVVVLWDLDNKPPRGPPYDAAVSLKTLASRFGEVTDFSAYANRHAFVHLPQWVLHERRERRSLDILERKGVVTPSEPYTCGVCGRKCKTHMDLKKHFKQLHQREREKKLNRLKSLKGKKKRDRFKERFLRGNHKYNEAARTLLVPKVGYGLAAELRRAGVFVKTVEDKPQAADWALKRQMVHSMSRGIDWLFLVSDDSDFSEMLRRAREADLGTVVVGDWDRALGRHADLWVPWSAVENGEVDLVPKRKKRREHGFQDIDGHDRDDWGVLNEDEELGQEFMLHSEDEDEDVENYYYDDDEEEEEEDGLYIF 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00280 375 Gene3D - 59 300 - -
Phco2g00280 375 ProSiteProfiles Zinc finger C2H2 type domain profile. 142 170 IPR013087 -
Phco2g00280 375 Coils Coil 162 182 - -
Phco2g00280 375 ProSitePatterns Zinc finger C2H2 type domain signature. 144 165 IPR013087 -
Phco2g00280 375 CDD PIN_LabA-like 152 283 - -
Phco2g00280 375 PANTHER C2H2-TYPE DOMAIN-CONTAINING PROTEIN 35 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00280 Phco-Chr2 2265076 2266203 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phco2g00280 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00280 2 2265076 2266203 Phco2g00280 2 2265076 2266203 ECH