Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00279 ATGGCGAGACTCCCTCACCCTCTCAGTATCTTCACACAATTCCATTACTGGCGCCCACTTCTGTGTTGCCACTATGCCAAACGTGCCCTAACTGCCGGTACTAACTTCTCCTCCCTCACTACATTAGCCCGAACGGACAAATCACGAGAGGGAGGAACAACCACGGTTAAGCATTCAAGCAAAGCGAGAAGAAAAGCTTTCTATGAATCTCCGGAAGGGGTCTTATTGCGTAAGCTAAACCAGTGCTCAAATGATGGAGATGTTGTTCAAGCCCTTTGCCACTATGACGAGGCTAGAAAATTGGGGGTTCTACTCAACCTTGATCACTATAACAAATTGCTATACTTGTGTTCTGTTGAAAATGCTGATGTTCCTCATTTGGGTCTCAAAAGGGGGTTTGAGATATTTCAGCAGATGTTGAATGACCGAGTTCAGCCCAATGAAGCCACTTTTACCAGTGCTGCTAGGCTTGCGGCTGCCAAGGAAGATCCCGATATGGCTTTCGAATTGCTAAAGCAGATGAAGAATGTTGGTATTGCTCCCAAGCTAAGATCGTATGAACCAGCTTTGTTTGGATTTTGCAAGAGGGGTGATGCTGAGAAAGCTTATCTAGTTGATTCTGACATGATTGAGTCTGGTATTGCGGCTGAAGAGCGTGAGCTTTCTGCTCTTTTGGAAGTCAGTGTCAAAACAAAGAAGGAAGACAAGGTGTATGAGATTTTGCACCGTTTGCGCGCAACAGTGAGACAGGTGTCTGAATCAACTTCACGGATAGTTCAGGACTGGTTTAACTCAGAATATGCTGCAAAAATTGGGAAGGAGAAGTGGGATGTTAACAAGGTGAGGGAAGGGATTCTTCAAGGAGGTGGAGGATGGCATGGTCAAGGGTGGCTTGGGAGTGGGCGATGGAAGATGGTGGACACTCAGGTGAATGAGGATGGTGTGTGTCTCTCGTGCGGTGAGAAGCTTGTAAGCATTGATATTGACCCAAAGGAGACCGAAACTTTTGCTGCCTCATTATCTAAATTAGCTTGCCAAAAAGAAGCCAAGGAAAACTTTGTTCATTTTCAGAAATGGCTTGAGCGGCATCGCCCGTTTGATGCTGTTGTAGATGGTGCAAATGTAGGCCTTTCCAATGGGCATAATTTCAGCTTTTCGAGGCTTAATACTGTTGTTGAACAATTACGTCAAATAAGCCCTTCGAAGAGATTGCCCCTTATAATTTTGCATATAAGTCGGGTAAATGGTGGTCCCGCTCAAAATCCAAAAAACAGGAGACTTATAGAAAATTGGAAGAAAAATGGTGCTCTTTATGCTACACCTCAAGGTTCAAACGATGACTGGTACTGGTTATATGCTGCTGTTAGTTGTAAATGCTTACTGTTAACAGATGATGAGATGAGGGACCACTTGTTCCAACTACTGGGTTCTAGTTTTTTTCCGAGATGGAAGGAAAAGCATCAGGTTCGAGCATCAACCTCAACTTCTGGAGGCTCCCTAATTATGCCTCCATGTTATTCTATAGTTATTCAGGAATCAGCCAATGGTAGCTGGCATGTGCCAACCGTGACTAGTGATGATCCTGAGATCCCAAGGAAATGGTTGTGTGCCACAAGATCCAAAAAAAATTCATTACATAGTGTATGGACATCCTCCTCCAGCATATTTTTTCCTGAAAACATACAGAAGGAGATAAAGAAACTTGAATCAGAAGCAGCAGTTAAAAAAACAGACTTTATTCCACCTTGGGAGCAATCAATTGATGCAACCCTCTATATAATCCAATAG 1788 0.4368 MARLPHPLSIFTQFHYWRPLLCCHYAKRALTAGTNFSSLTTLARTDKSREGGTTTVKHSSKARRKAFYESPEGVLLRKLNQCSNDGDVVQALCHYDEARKLGVLLNLDHYNKLLYLCSVENADVPHLGLKRGFEIFQQMLNDRVQPNEATFTSAARLAAAKEDPDMAFELLKQMKNVGIAPKLRSYEPALFGFCKRGDAEKAYLVDSDMIESGIAAEERELSALLEVSVKTKKEDKVYEILHRLRATVRQVSESTSRIVQDWFNSEYAAKIGKEKWDVNKVREGILQGGGGWHGQGWLGSGRWKMVDTQVNEDGVCLSCGEKLVSIDIDPKETETFAASLSKLACQKEAKENFVHFQKWLERHRPFDAVVDGANVGLSNGHNFSFSRLNTVVEQLRQISPSKRLPLIILHISRVNGGPAQNPKNRRLIENWKKNGALYATPQGSNDDWYWLYAAVSCKCLLLTDDEMRDHLFQLLGSSFFPRWKEKHQVRASTSTSGGSLIMPPCYSIVIQESANGSWHVPTVTSDDPEIPRKWLCATRSKKNSLHSVWTSSSSIFFPENIQKEIKKLESEAAVKKTDFIPPWEQSIDATLYIIQ 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00279 595 Gene3D - 328 502 - -
Phco2g00279 595 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 147 181 IPR002885 -
Phco2g00279 595 Gene3D Tetratricopeptide repeat domain 71 539 IPR011990 GO:0005515
Phco2g00279 595 FunFam Proteinaceous RNase P 2 328 502 - -
Phco2g00279 595 Pfam Protein-only RNase P 310 536 IPR031595 -
Phco2g00279 595 FunFam Proteinaceous RNase P 1, chloroplastic/mitochondrial 72 338 - -
Phco2g00279 595 CDD PIN_PRORP-Zc3h12a-like 368 490 - -
Phco2g00279 595 PANTHER UNCHARACTERIZED 50 540 - -
Phco2g00279 595 Pfam Pentacotripeptide-repeat region of PRORP 63 269 IPR033443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00279 Phco-Chr2 2259178 2264727 Proximal