Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00277 ATGAAGGTGCATCAGTTCGCACGTGGATTCTGGGAGCATGAACCCTCCCTCACACTTGGGTGCAAACGCTTACGCCCCCTTGCCCCCAAGCTTTCCAACACCAACTCCACTACCTCTATCACTTCACCTCCTGTCACAACTTTCGACCTCAAGAGCTTCATCAAACCAGAAAGTGCCTCCAGAAAACTTGGATCCTGTGACCAGAATAAGACAGACCCTACTTCACCTCAGGGCCAGGTGGAAACGCATATTCCAGGAGGGACCCGGTGGAATCCGACTCAGGAACAGATAGGGATACTGGAGATGCTGTATAGAGGAGGGATGCGAACACCGAATGCTCAACAAATAGAGCACATCACAGTCCAACTTAGCAAGTACGGCAAGATCGAAGGGAAGAACGTGTTCTATTGGTTCCAAAACCACAAGGCACGCGAGAGACAAAAGCAGAAGCGTAACAACCTAGGCCTTGCTCATAGTCCTCGTACTCCCACCACACTACTGTCACCTTCCTTTAGTTGTAGTGTAATAACCTCTTTGGACACGACAAAACGGGGGGAGGGAGTAGAAAGAGATGAAGAAGATAGCCCTTTGAAGAAGTGTAGGAGCTGGGCATTTGAGTACTTGGAAGACCAAAGTTGGTCATCATGGAAAGAGGAAGAACACAGAACTCTGGAGCTTTTCCCATTGCACCCGGAAGGCAGATGA 705 0.495 MKVHQFARGFWEHEPSLTLGCKRLRPLAPKLSNTNSTTSITSPPVTTFDLKSFIKPESASRKLGSCDQNKTDPTSPQGQVETHIPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEHITVQLSKYGKIEGKNVFYWFQNHKARERQKQKRNNLGLAHSPRTPTTLLSPSFSCSVITSLDTTKRGEGVERDEEDSPLKKCRSWAFEYLEDQSWSSWKEEEHRTLELFPLHPEGR 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00277 234 SMART HOX_1 85 152 IPR001356 GO:0003677
Phco2g00277 234 MobiDBLite consensus disorder prediction 146 165 - -
Phco2g00277 234 SUPERFAMILY Homeodomain-like 87 151 IPR009057 -
Phco2g00277 234 PANTHER WUSCHEL-RELATED HOMEOBOX 4 1 234 IPR044186 GO:0003700|GO:0010067|GO:0010087|GO:0051301
Phco2g00277 234 Gene3D - 87 154 - -
Phco2g00277 234 ProSiteProfiles 'Homeobox' domain profile. 93 148 IPR001356 GO:0003677
Phco2g00277 234 Pfam Homeodomain 88 147 IPR001356 GO:0003677
Phco2g00277 234 FunFam WUSCHEL-related homeobox 4 87 154 - -
Phco2g00277 234 CDD homeodomain 88 149 IPR001356 GO:0003677
Phco2g00277 234 MobiDBLite consensus disorder prediction 62 92 - -
Phco2g00277 234 MobiDBLite consensus disorder prediction 59 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00277 Phco-Chr2 2204793 2206231 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Phco2g00277 Homeodomain 2.6e-18 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00277 2 2204793 2206231 Phco2g00277 2 2204793 2206231 ECH