Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00274 ATGGAAGACCAAGCGAACGATGCACTACCTCCTGGTTACCGGTTCTACCCGTCCGAAGAGGTTCTCCTCCGCTATTATTTAACCAAGAAAAACGAGAACCGGGAGGGGGGGTTCAACGGTTCTGATTTGATCAAGGAACTGAACCTGTACGATCACGACCCCTTCGAATTACCGGATGCTACGTGCTTTCCGTACGGTTACCGAGGGAGGAAGAAGCATTGGTTCTGTTACACTGTTAAAGAGACCAAACGTGGAAGCAGAAAGGTCAAAAGCGGGTTTTGGCTCCGGAAGGGAAGGGTTCAGGAAATTCGCGATAACGGTGGGATTGGGAACGCTGTTTTAGGCACCAGGTCGCGTTTCGTTTTCTACGTCGGGAATTCGCTGAAAAACGCTTCCAGAACGGATTGGATTTTGTACGAGTACGCATTGGTTGACCAAATTCTGGCTTCGCTCGTGCTTTGTCGTGTGGTGAATAAGCCTCATCACAAGAATAGTCCGTCGGAAATTGGTCGCAGTTGTTGTGCTGAAGAGAGTGCCGCTGTGGCCGTGCGTCACATTGGTGTTCAGCATGATGGATGTGTGGGAGGTGAAGTTCAGGTGTGTGATGAAGGCTTTGTTAATAGAGAGATTGAAGCTGCTGAGAATCCAATTAGGTGTGGTGGTGAACATGATCGTGCTGCACTTGTTTCAGTTGCTCAGGGAAGTCAACCGGTTCAGGAAGGACTTTCTGGACTTCCCTCTGGCAGTGCATTGTTCATTGAAGCTGTGACATCTCAACAACATATGCTTTCCATTCTAGAAGAGGATTTCATAGAATTGAATGATATTGTATGA 834 0.4796 MEDQANDALPPGYRFYPSEEVLLRYYLTKKNENREGGFNGSDLIKELNLYDHDPFELPDATCFPYGYRGRKKHWFCYTVKETKRGSRKVKSGFWLRKGRVQEIRDNGGIGNAVLGTRSRFVFYVGNSLKNASRTDWILYEYALVDQILASLVLCRVVNKPHHKNSPSEIGRSCCAEESAAVAVRHIGVQHDGCVGGEVQVCDEGFVNREIEAAENPIRCGGEHDRAALVSVAQGSQPVQEGLSGLPSGSALFIEAVTSQQHMLSILEEDFIELNDIV 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00274 277 SUPERFAMILY NAC domain 8 159 IPR036093 GO:0003677|GO:0006355
Phco2g00274 277 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 9 168 - -
Phco2g00274 277 Pfam No apical meristem (NAM) protein 10 143 IPR003441 GO:0003677|GO:0006355
Phco2g00274 277 Gene3D NAC domain 18 164 IPR036093 GO:0003677|GO:0006355
Phco2g00274 277 ProSiteProfiles NAC domain profile. 9 159 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00274 Phco-Chr2 2187139 2189713 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phco2g00274 NAM 1.6e-21 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00274 2 2187139 2189713 Phco2g00274 2 2187139 2189713 ECH