Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00273 ATGCAAGGGCAGAGAGGTACAATTGGTTCCTTGCAAGAAACCATAGAATTTGATACATCAAGTACTGCTACAGTTGATCAACATATTTTCTGGAACAATATGCGTAATCCTGCAGAAAATCATTTTGCACTTCCCCCCAGTGATTTAAACCCGTCGTACGCAAATCCTGTAAACCATGAATGGCAGAACCTTAGTGGATGGAGCCTAGGTGAGCCAAGTTCCAGTAATACTCAGAACGAGGTTACTAACAATGAGCAGAAAGGAGAGGTAGGATTATCATCTTCAATAAGTTCTGGTCCTATAGCTGGTCCAAGACTTGAAGAAAGGCGCTTTGAACCAAACAATACTTTTTCGTTGGACAATGTCAATACAAGTTCCATGTATATGCGCAGCTCCAATTCTCACTTGGTGCCTCAGAATCTCAACCTAAATGCAAGCATAGCAGATAGTGTCACTGATAATGGCTATCGTGTGGAACATCCTCCTAACTTGAACAAGTCTAGTGGACCGGTAAATGAGCATATTCCACCTTCAATTGGTTCTGGTCCTTTTCTGCTTCCTTCTGGCACTAATGGCTTTTTGGTTGAGGATACTGATGGTAGGCCTGGTTGTTCTCTAGACACCCGCCGTGTATCTTGTAAAAGAAAGGCTGTTGAACGAAGTGTTGGGCAATCTTCAGGTGGTGGAAGTTCTAGCTATACTCAGCATACGGATGGTAGTTCTTGGAACACTCTTCCTACTCAGGATTATGGTGGAAGCAGTTTTAACAGATCTGCCTCAACAGAACAGGTAAATGCAAGACTCTGTCTGAGTACTGGGGATGGAGCCTCTGAGAGCATTCCTTGGTCAAATGTTGCAGGAAGCTCAGAAAGCTTCCACAGAAATTTTCGTGTGAGGATAAATCCTTCAAGTCAACAAATTTCCGTTCCTCCCCCTGCAATCTCAAGTGGGAGTGTTATTAGGAATTCTGGTGTTTCTTCGTCCTCTCCAATGATGCAACGGTTTCACCCTGTTGATAATTCTTTGGACTTGAGGTCAGCACCACCTGTTGATACTATGGTTCCTCAAAGCCAGCCCCTTGTAATTCATGTTCCAGCTTTACCAAGGAATGTGCAGCCATTCAGGTGGAATGGAGGTTCCAGCTCAACGAACAATCATCCTTCAAGCTCAGTTGTATGTGCAGATAGAAATAATTTACCAAACGAGGAACCAAGTTCAAGAAGTATGCCTAGAAACATTGTAGAATACCCGATGTTTGTGCCTGCAACCAATTTAAGAAATGTGGTTAGAAATCCAACTAGAGCTTCAAATAGTGCAAATTTAAGTATTCCAGGAAATGTTGGTTCTTCATCGAGGGCAGGCTCAAATTCAGCTGTCAATCCACCATCTGCTCCGGCCTGGGTTTCTCGCCCTAATCCTCAGCAGTATCCTCGCAGGTTATCTGAATATGTTCGTCGGTCTTTGTTTTCTCCTGGTTTGGAAGCTGCTGGAAGTTCAAGCAACAATTATGCTTCCTTCCGTGGTCCTTCTACTTCATCTGGGGTAAACCCATTTGAGAGGCAAGGTGATAGTGAATTTGGAATTCAGTATTCTTTACGATCATTGGCTGCTGCTGGTGAAGGAAGTAGTAGACTTGTATCTGAGCTCCGCAATGTATTGGGCCTCATGCGTAGGGGAGGGAACCTACGATTTGAGGATGTTATGATCCTGGACCATTCAGTGTTCGCTGGAATTGCTGATATGCATGATCGACACAGGGATATGCGACTTGATGTTGATAACATGTCTTATGAGGAGCTATTGGCTTTGGAAGAACGCATTGGAAATGTGAGCACTGGCTTGAATGAGGAGACCATATTAAAACACATGAAAAATAAGAAGTATTCAGCTAAACCAGGTTCTCAGCATGAGGCAGAACCCTGTTGTGTTTGTCAGGAGGAGTACAAAGATGGAGATGCTTTAGGATCACTGGATTGTGGGCATGATTACCATACCGAATGTATTAAGCAGTGGCTAATGCATAAGAATCTGTGTCCCATTTGTAAGACAACAGGCTTGAAAACATGA 2067 0.4349 MQGQRGTIGSLQETIEFDTSSTATVDQHIFWNNMRNPAENHFALPPSDLNPSYANPVNHEWQNLSGWSLGEPSSSNTQNEVTNNEQKGEVGLSSSISSGPIAGPRLEERRFEPNNTFSLDNVNTSSMYMRSSNSHLVPQNLNLNASIADSVTDNGYRVEHPPNLNKSSGPVNEHIPPSIGSGPFLLPSGTNGFLVEDTDGRPGCSLDTRRVSCKRKAVERSVGQSSGGGSSSYTQHTDGSSWNTLPTQDYGGSSFNRSASTEQVNARLCLSTGDGASESIPWSNVAGSSESFHRNFRVRINPSSQQISVPPPAISSGSVIRNSGVSSSSPMMQRFHPVDNSLDLRSAPPVDTMVPQSQPLVIHVPALPRNVQPFRWNGGSSSTNNHPSSSVVCADRNNLPNEEPSSRSMPRNIVEYPMFVPATNLRNVVRNPTRASNSANLSIPGNVGSSSRAGSNSAVNPPSAPAWVSRPNPQQYPRRLSEYVRRSLFSPGLEAAGSSSNNYASFRGPSTSSGVNPFERQGDSEFGIQYSLRSLAAAGEGSSRLVSELRNVLGLMRRGGNLRFEDVMILDHSVFAGIADMHDRHRDMRLDVDNMSYEELLALEERIGNVSTGLNEETILKHMKNKKYSAKPGSQHEAEPCCVCQEEYKDGDALGSLDCGHDYHTECIKQWLMHKNLCPICKTTGLKT 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00273 688 MobiDBLite consensus disorder prediction 205 258 - -
Phco2g00273 688 FunFam E3 ubiquitin-protein ligase MBR2 609 686 - -
Phco2g00273 688 MobiDBLite consensus disorder prediction 223 258 - -
Phco2g00273 688 ProSiteProfiles Zinc finger RING-type profile. 641 682 IPR001841 -
Phco2g00273 688 MobiDBLite consensus disorder prediction 435 463 - -
Phco2g00273 688 Pfam Ring finger domain 641 682 IPR001841 -
Phco2g00273 688 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 209 686 IPR045191 GO:0061630
Phco2g00273 688 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 605 685 IPR013083 -
Phco2g00273 688 MobiDBLite consensus disorder prediction 374 408 - -
Phco2g00273 688 MobiDBLite consensus disorder prediction 64 113 - -
Phco2g00273 688 SMART ring_2 641 681 IPR001841 -
Phco2g00273 688 MobiDBLite consensus disorder prediction 374 410 - -
Phco2g00273 688 MobiDBLite consensus disorder prediction 494 516 - -
Phco2g00273 688 MobiDBLite consensus disorder prediction 435 474 - -
Phco2g00273 688 MobiDBLite consensus disorder prediction 64 100 - -
Phco2g00273 688 SUPERFAMILY RING/U-box 640 684 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00273 Phco-Chr2 2168276 2171713 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00273 2 2168276 2171713 Phco2g00273 2 2168276 2171713 ECH
Phco2g00273 2 2168276 2171713 Phco7g00462 7 3341472 3348087 PCT