Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00271 ATGGCTTTCCCTCAGCACCACTTCCAACGGCACTACCAAACCCAACAACAACAGCCACAAACCAAACCCTTCAGAAATCTGCAAGCAATCGATGGTCAGATGCCACAGCAGGTGGCGTTTTACAACCCTTCTGATTTGCAAGATCAGTCCCAGCATCCACCCTATATACCTCCCTTTCATGTTGTTGGGTTTGCTCCGGGTCCTGTTCCTCCTGCTGATGGCAGTGATGGTGGAGTTGATTTGCAATTGCAATGGAATTATGGTTTGGAGCCAGAGAGAAAGAGACTTAAAGAACAGGACTTTTTGGAGAACAATTCTCAGATATCTTCTGTTGATTTCCTCCAACCACGATCAGTGTCAACTGGGTTAGGCTTGTCACTCGACAATACTCGCCTGACATCCACTGGAGACTCAGCTTTGTTGTCACTCATTGGCGATGACATTGAGCGTGAGTTGCAGCAGCAGGATGTAGAGATAGATAGATTTCTCAAAGTGCAGGGTGAAAGACTGCGTCAATCAATCTTAGAAAAGGTTCAAGCAACACAGCTTCAGAGTGTCTCACTCATTGAAGACAAAGTCCTTCAGAAACTACGTGAGAAAGAAGCTGAGGTTGAAAGTATCAATAAGAGGAACATGGAACTCGAAGATCGAATGGAGCAGTTGACTGTGGAAGCTGGTTCATGGCAGCAGCGAGCAAGATACAATGAAAACATGATTGCTGCTCTCAAGTTCAACCTTCAGCAAGCATATGTCCAAAGCAGAGATAGTAAAGAAGGATGTGGTGACAGCGAGGTTGACGACACAGCTTCTTGCTGCAATGGCCGTACCCTTGATTTTCATCTGCTTTCCAAGGAGAATTCTGATATGAAAGATATGATGACATGCAAGGCTTGCAGAGTGAATGAAGTGACCATGGTTTTGTTACCTTGTAAGCATCTTTGCCTCTGTAAAGATTGTGAAAGTAAGCTTAGTTTCTGTCCTCTATGTCAATCCTCCAAATTTATAAGCATGGAGGTCTACATGTAA 1026 0.4444 MAFPQHHFQRHYQTQQQQPQTKPFRNLQAIDGQMPQQVAFYNPSDLQDQSQHPPYIPPFHVVGFAPGPVPPADGSDGGVDLQLQWNYGLEPERKRLKEQDFLENNSQISSVDFLQPRSVSTGLGLSLDNTRLTSTGDSALLSLIGDDIERELQQQDVEIDRFLKVQGERLRQSILEKVQATQLQSVSLIEDKVLQKLREKEAEVESINKRNMELEDRMEQLTVEAGSWQQRARYNENMIAALKFNLQQAYVQSRDSKEGCGDSEVDDTASCCNGRTLDFHLLSKENSDMKDMMTCKACRVNEVTMVLLPCKHLCLCKDCESKLSFCPLCQSSKFISMEVYM 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00271 341 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 281 341 IPR013083 -
Phco2g00271 341 Pfam Zinc finger, C3HC4 type (RING finger) 293 331 - -
Phco2g00271 341 Coils Coil 190 231 - -
Phco2g00271 341 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 93 339 IPR017066 -
Phco2g00271 341 MobiDBLite consensus disorder prediction 1 22 - -
Phco2g00271 341 CDD mRING-HC-C3HC5_CGRF1-like 294 329 - -
Phco2g00271 341 ProSiteProfiles Zinc finger RING-type profile. 295 330 IPR001841 -
Phco2g00271 341 MobiDBLite consensus disorder prediction 8 22 - -
Phco2g00271 341 PIRSF SBP1_RNase_bind 4 341 IPR017066 -
Phco2g00271 341 FunFam probable BOI-related E3 ubiquitin-protein ligase 2 276 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00271 Phco-Chr2 2153711 2156308 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00271 2 2153711 2156308 Phco2g00271 2 2153711 2156308 ECH