Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00263 ATGTCTCTGTTTCGGTTATTGTGGGTACTGCTTCTGTGGATGGTGTGGTCAGAAGCTATTGCTAATGCAAATGATTATGAGATAAAAGGAAACATCATAGGAGAGAGCTCAATATTGAAGTCCAAGATTGTTGTGAACATTGGAGCAGCCATAGAGTTGAATTCTCGTGTGGGAAAGGAACAGAAGATAGCAATGGAAGTTGCAATTGAAGATGTGAATCGACAGAGTTGCTATGAGCTTGCCTTGAACTACAGTTATAACATTCATCGGAACCCATCATCTCCCACTATGTTGGCTGCGGATCTTGCAAACAGCAAACAAGTGGAAGTTGTGGTAGGAACAAAGCTCGATGCAGCAACATTATTCCTCTGGATTGATGAAAACTCAAAGGATGTCCCCATCATATCTCTAACCTCAACAGCTAGTCCAGAAATAACTTCAATCCCATTGCCACACTTCATCCAAATGGGTTATGATGTCACCCTTCACATGCACTGCATTGCATCCATCGTACACCAATTCCATTGGCCAAAGGTTACTGCAATTTACGAACACAACAACCTCTTTACCTCTCATTCAGACATACTCACAACACTCTCTTACTCTCTACGCCTAGTCAATGTTGAGATCGATCACCATGTTGCTTTTCCTTCAATGGCCATTCTTTCAAACCCAATTGAGAGCATAGAACAAGAGCTCACAAGGCTCAAGAACAAGAGCAATAGGGTGTTCTTGCTTATTCAATCTTCCTTGGAGTTTGCCACTTTGCTATTTGAGAAGGCAAAGCAAATGGGAATGATGGAAAAAGGGTCAGTGTGGATCATTGCAGATGATGTGGCTAACCACCTTGATTCCTTTGATTCTTCTGTCACTTCTAACATGCAAGGCGTCATGGGGTGCAAAACCAACTTCATGGAAATGAGTCAAACGTTCAAACGTTTCAAGTTCATGTTTAGGAGAAAGTTTGTATTGGAATACCCTGAAGAAGAAAGATCCCAACCGAGTGTCTTTGCTCTTAGGGCTTATGATGCTGTTTGGACCATTGCTAAAGCCTTGGAGAGCTCACAAGGAAACTTTTCCTTATCAGAAAATATCTTACGTAGTGATCAAGAGGGCCTCAGTGGGAAGATAAGGTTCAAACGAAGAATGTTATTGGAACCACCAATCTTTAAGATTGTCAATGTTATTGGAAAAGGTTACAAAGAGTTAGCATATTGGTCAATGGAGTACGGTTTTAGTGAGGGCCTTGTTGAGCATGAGGTGGTAAACACAACAACAACTAGTGCTGGTTCTGCTAGAATGCTTTTAGGTTCTGTAGATTGGCCTGGTGGGTTGAAAACAGTTCCAAAAGGTTGGGTGTACAATAGTACTGAAGGAAAGCCTTTGAAAATTGGGGTTCCTGCTGTTGATCCATGTCCTCAGTTTGTGAATGTGAGCCATGATAAGGGACTGAATGAAACCCAATTCACTGGTTTCTCAATCAATGTCTTTGAATCAATTGTGCAACGCCTGCCTTATCACCTGCCTTTTGTTTTTGTGCCATTTTATGGCTCTTACGATCAGATAGTTGAACATGTCAACAATAAGTACCTTGATGCTGCTGTGGGGGATATCCAAGTGGTGGAACATAGATATGCATTTGCTGAATTCAGTCATCCATATATTGAATCTGGCATAGCCATGGTAGTGAAAGTAAAGCCAGATAGATCCAAAGAAACATGGATGTTCATGGACGCTTTCACAAAAGAAATGTGGATGTTAACGGCAGCACTGCATCTGTTCATAGCACTTGTAATCTGGTTAATTGAAGGTGAAAACAATTCGGAGCTCGAGAGTTTTGGGGCCATTCTCTGGTTTTCTGTCACCACATTATTCTTTATACATAGAGAACCTGTAAATAGCAACTTGGCCAGAGTAGTGCTAGCACCTTGGTTATTTGCTATTCTGATAGTGACTCAAAGTTTTACAGCGAGCCTTTCATCCATGATGACAGTGTCCCATCTTGAACCAGCTGTGCCTGATATAGAAACACTGCTGAGGACAAATGCAATCATAGGGTGCAATAAGAACACTTTTTTGGTCCATTACTTAGTTGATGAACTCAAATTCCAGCCACAGAATATCATGGTCTTTGACTCCATCCATGATTTCCCAAGAGCCTTTGAGAACAAAGAAATTGTGGCTTCTTTTACCATTGCCCCTCATGCTGATGTCTTCCTAGCTACCTATTGCAAGGGCTACATCAAAGCAGGACCCACCTTGAAGCTTGGTGGATTAGGCTTCGCATTTCCAAAAGGTTCACGTTTAGCAATTGACATATCCCGAGCAACCTTAAAAGCCATAGAAAGTGGAGAAGTGCAAAAATTAGAAGAGAAAATGTTGTCAACAACTAATTGTGGATCTACAAACAACAAAATACAAAATGAACAACTTGGTCCTCAACCTTTCTTTGGCTTATTTTTCATTTGTGCAACCATTGCTCTCATTGGTTTATTGGCAACCATTGTTCACTTTGTTAGAAGGAATGCAGAAACATTTATGAATTACATATTGTTGTCACAGTTACAAATAGGATTGCAAATAATCAAACTTCTAGCTCAAAAGCATCTATACAAGTACAGAAGGAGTGCACCTGCTCAAGATGCAAATAGTGGAGAAAATGTATCTCATAACAATGAGCTAGCTACACCAAGCATTGAGTTTGCAATTTACTACCACACATGA 2724 0.4068 MSLFRLLWVLLLWMVWSEAIANANDYEIKGNIIGESSILKSKIVVNIGAAIELNSRVGKEQKIAMEVAIEDVNRQSCYELALNYSYNIHRNPSSPTMLAADLANSKQVEVVVGTKLDAATLFLWIDENSKDVPIISLTSTASPEITSIPLPHFIQMGYDVTLHMHCIASIVHQFHWPKVTAIYEHNNLFTSHSDILTTLSYSLRLVNVEIDHHVAFPSMAILSNPIESIEQELTRLKNKSNRVFLLIQSSLEFATLLFEKAKQMGMMEKGSVWIIADDVANHLDSFDSSVTSNMQGVMGCKTNFMEMSQTFKRFKFMFRRKFVLEYPEEERSQPSVFALRAYDAVWTIAKALESSQGNFSLSENILRSDQEGLSGKIRFKRRMLLEPPIFKIVNVIGKGYKELAYWSMEYGFSEGLVEHEVVNTTTTSAGSARMLLGSVDWPGGLKTVPKGWVYNSTEGKPLKIGVPAVDPCPQFVNVSHDKGLNETQFTGFSINVFESIVQRLPYHLPFVFVPFYGSYDQIVEHVNNKYLDAAVGDIQVVEHRYAFAEFSHPYIESGIAMVVKVKPDRSKETWMFMDAFTKEMWMLTAALHLFIALVIWLIEGENNSELESFGAILWFSVTTLFFIHREPVNSNLARVVLAPWLFAILIVTQSFTASLSSMMTVSHLEPAVPDIETLLRTNAIIGCNKNTFLVHYLVDELKFQPQNIMVFDSIHDFPRAFENKEIVASFTIAPHADVFLATYCKGYIKAGPTLKLGGLGFAFPKGSRLAIDISRATLKAIESGEVQKLEEKMLSTTNCGSTNNKIQNEQLGPQPFFGLFFICATIALIGLLATIVHFVRRNAETFMNYILLSQLQIGLQIIKLLAQKHLYKYRRSAPAQDANSGENVSHNNELATPSIEFAIYYHT 907
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00263 907 Gene3D - 683 757 - -
Phco2g00263 907 Gene3D - 39 162 - -
Phco2g00263 907 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 45 867 IPR015683 -
Phco2g00263 907 FunFam Glutamate receptor 573 706 - -
Phco2g00263 907 Pfam Ligand-gated ion channel 794 824 IPR001320 GO:0015276|GO:0016020
Phco2g00263 907 Pfam Bacterial extracellular solute-binding proteins, family 3 486 793 IPR001638 -
Phco2g00263 907 SMART GluR_14 463 796 IPR001320 GO:0015276|GO:0016020
Phco2g00263 907 CDD PBP1_GABAb_receptor_plant 46 416 IPR044440 -
Phco2g00263 907 Gene3D - 454 585 - -
Phco2g00263 907 SUPERFAMILY Periplasmic binding protein-like I 44 452 IPR028082 -
Phco2g00263 907 PIRSF IGluLR_plant 353 893 IPR017103 -
Phco2g00263 907 PIRSF IGluLR_plant 1 364 IPR017103 -
Phco2g00263 907 Pfam Receptor family ligand binding region 62 396 IPR001828 -
Phco2g00263 907 SUPERFAMILY Periplasmic binding protein-like II 441 792 - -
Phco2g00263 907 Gene3D - 163 331 - -
Phco2g00263 907 CDD GluR_Plant 460 794 - -
Phco2g00263 907 Gene3D - 758 792 - -
Phco2g00263 907 FunFam Glutamate receptor 163 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00263 Phco-Chr2 2066112 2071001 Dispersed/Transposed